Clavelina lepadiformis (light-bulb sea squirt): 143449930
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Entry
143449930 CDS
T11416
Name
(RefSeq) hepatic lectin-like
KO
K06563
C-type lectin domain family 4 member L/M
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Pathway
clep03260
Virion - Human immunodeficiency virus
clep03264
Virion - Flavivirus and Alphavirus
clep03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
clep03273
Virion - Lassa virus and SFTS virus
clep04145
Phagosome
clep04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03260 Virion - Human immunodeficiency virus
143449930
03264 Virion - Flavivirus and Alphavirus
143449930
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
143449930
03273 Virion - Lassa virus and SFTS virus
143449930
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
143449930
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
143449930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clep04131
]
143449930
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
clep04054
]
143449930
04515 Cell adhesion molecules [BR:
clep04515
]
143449930
04090 CD molecules [BR:
clep04090
]
143449930
04091 Lectins [BR:
clep04091
]
143449930
Membrane trafficking [BR:
clep04131
]
Endocytosis
Phagocytosis
C-lectin receptors
143449930
Pattern recognition receptors [BR:
clep04054
]
Membrane-bound pattern recognition receptors
C-type lectin receptors
143449930
Cell adhesion molecules [BR:
clep04515
]
Lectins
Selectins and C-type lectins
143449930
CD molecules [BR:
clep04090
]
Proteins
143449930
Lectins [BR:
clep04091
]
C-Type lectins
Asialoglycoprotein and DC receptors
143449930
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lectin_C
2-thiour_desulf_put
Motif
Other DBs
NCBI-GeneID:
143449930
NCBI-ProteinID:
XP_076806388
LinkDB
All DBs
Position
3:complement(3002809..3004043)
Genome browser
AA seq
179 aa
AA seq
DB search
MKMILVLVVISLFFHNCRGTPIDCHYEVSKLRKELQASVASEWFVMFNGYKYRLTRRGTW
TEARSECQELGGDLATVGARDSYARRIIWLRLGKPRPWIGLHDLEREGEFTWIDGVLGDR
NLDWNDDEPNNAELYEERIGVADSRIFLGDEDCGNLYQGKLSDENCAFTFPGLCEKKVN
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgattttggtactggttgtcatatcactcttctttcataactgccgtggaacc
ccaatcgattgccattacgaagtgagcaagcttcgcaaagaattacaagcttcagttgct
tccgaatggtttgtgatgttcaatggctataaatacaggctgacgcgacgaggtacctgg
actgaagcaagatcggaatgtcaagaacttggtggtgatttggcaaccgttggggccaga
gactcatacgcaagaaggatcatctggctgcgtttaggcaaacccaggccttggatcggg
ctccacgacttagaaagagaaggagaatttacttggatcgacggagttttaggagatcga
aatcttgactggaacgacgatgaacccaataatgcggagttgtatgaagaacgtatcgga
gttgccgactcccgcatcttcttaggagatgaagattgtggaaatttataccaaggaaaa
ttgagtgatgaaaactgtgccttcacatttcctggactttgcgagaaaaaagtcaattaa
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integrated database retrieval system
