Clavelina lepadiformis (light-bulb sea squirt): 143451523
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Entry
143451523 CDS
T11416
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase lunatic fringe-like
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Pathway
clep00514
Other types of O-glycan biosynthesis
clep04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
143451523
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
143451523
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
clep01003
]
143451523
Enzymes [BR:
clep01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
143451523
Glycosyltransferases [BR:
clep01003
]
Glycan extension
O-Glycan
143451523
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
143451523
NCBI-ProteinID:
XP_076808297
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All DBs
Position
1:complement(5450395..5455152)
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AA seq
472 aa
AA seq
DB search
MLCRPVSRSSHHVTVLVLKFSACLTLLNLCVTLVLLVSKPQNITVVQSLYSRSSNGEQLD
DQTQSKIVRYTHWLREALAEEERDSSLSPDAVKNARPNVPLRHFTQSDLLDSDYLNASEV
RRWMEPTGFYQQIMQSIMGRWNVNQAVKQSKNAADSTDSFLSDIGSVYFSVRTTHSNYFT
RLALMLDTWITVARSHVKIVADVEDKSLLDTLAKKFEGQHPKMIFTDCPQNSHSKWALLC
KTYWEFQEFLRQPSTQKSWFCHFDDDTFVNVHALLAMLRHFNSNLPFYIGRSPSQRAIIT
RVYDTKSSNKPQYLEKEDIYAITDKSKLVAFHFALGGAGYCLSRRLVHEMAPYLQTQTFV
TTAASISLPDDCVIGYIITHLLNVSLTDSDVMHSQFEPMTSMRNEELIGQVTFSFNQSQS
FVSRIAGDYNDLEMGRNDTVASSINTSYDYSRIKNFFSFYKEYFFQYLNRVS
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgctatgtaggccagtcagccgttcctcgcaccacgtcaccgtgttagttttaaagttt
tctgcttgcctaactttacttaacttgtgtgtgacgttggtgttactcgtatccaagccg
caaaatattacagtcgtacaaagtctgtattctcgctcttcgaatggagagcagttagat
gatcaaacacaatcgaagatagttcgttacacgcactggctgagagaagcgttggccgaa
gaagagagagattcaagtctgagtcctgacgccgtaaagaatgccagacccaacgtgcca
cttcgtcacttcacgcaatcagacttgctggacagcgactatctgaacgcctcagaggtc
agacggtggatggaaccaactggattttatcagcagattatgcaaagcattatgggaaga
tggaacgtgaaccaggctgttaaacaatcaaagaatgcggcagattcaacggattcattt
ctttcagatatagggtcggtgtacttcagtgtccgcacaacccattcgaattacttcaca
agactcgccttaatgttggacacctggattaccgtggcgagaagccacgtcaagatagtg
gcagatgttgaagataaatctttgctcgacactcttgccaagaaatttgaaggtcaacac
ccaaagatgatcttcacagactgcccgcaaaactcgcacagcaagtgggcactgttgtgc
aaaacctattgggaatttcaggagtttctgcgccagccaagcacccaaaaaagttggttc
tgtcactttgatgacgacacttttgtcaacgttcacgctctgctggccatgttacgtcac
ttcaattcaaatttacctttctacatcggtcgctctccgtcacaaagggcgattattacg
cgcgtgtacgacaccaaatcttcaaataagccgcagtatctggagaaggaggacatctac
gcgatcaccgacaagtcaaagcttgttgcgtttcattttgctttgggaggtgccggatat
tgcctgtcaaggagactcgtacacgagatggcgccctatcttcagactcaaacctttgtg
actacagcggcatctatttcccttcctgacgattgcgtcatcggttacatcattacacac
ctacttaacgtgtcactaaccgatagtgacgtcatgcattctcagtttgaaccgatgacg
tcaatgaggaacgaagagctgattggtcaagtaacattcagcttcaaccaatcgcagtct
ttcgtgtcgagaattgcaggagattataatgacctggaaatgggtagaaacgacacggtg
gcctccagcataaacacttcatacgattattctagaataaaaaactttttctctttttat
aaagaatacttttttcaatatttaaatcgtgtttcctga
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