Clavelina lepadiformis (light-bulb sea squirt): 143451610
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Entry
143451610 CDS
T11416
Name
(RefSeq) E3 ubiquitin-protein ligase Mdm2-like
KO
K06643
E3 ubiquitin-protein ligase Mdm2 [EC:
2.3.2.27
]
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Pathway
clep04068
FoxO signaling pathway
clep04120
Ubiquitin mediated proteolysis
clep04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
143451610
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
143451610
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
143451610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clep04131
]
143451610
04121 Ubiquitin system [BR:
clep04121
]
143451610
Enzymes [BR:
clep01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
143451610
Membrane trafficking [BR:
clep04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
143451610
Ubiquitin system [BR:
clep04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
MDM2/MDM4 proteins
143451610
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
zf-C3HC4_3
Zn_ribbon_RanBP
SWIB_eIF2D
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
143451610
NCBI-ProteinID:
XP_076808425
LinkDB
All DBs
Position
4
Genome browser
AA seq
441 aa
AA seq
DB search
MASKQYFSTKPKLLAILQMAGASGQLFTADQVVGLLGKYIESNKLYDPLNKRIIHCKNDL
LGEVFQVDQFTVTDFKNLWKFIFPCLFPATKKEMSSNELQQNQTCNELHGCSQTGESSSS
ELPWWYYVSGKTRHGEADDETEGGSYTGRETIDIHDVDSEFEESVDACDGDEIFQGEYEP
VDESDSDTDSDDTIPVTSDEEENMPNIASLQKFQTDSDDDTSTTDLSMDSDILLEEHWAC
IECGTMNMPTVGYCMRCWKLRKGWVKAHDIQRSFTEPSKPTNHPLPMHRGFSLDVADGRT
RTPDGHTSEASCSSQSTIVPTIPSFASPLKHKLEDAPETSLASEGSEPKKMHLDDTLPTQ
SMESVMSSSSQATTSSSENNSFPGLCNICRNNPNDAVIIHRNISHQFCCFRCAKRLKKKG
KTCPVCRQPIMLVIRNFIVQF
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggcatccaaacaatattttagtacaaagccaaaacttttggccattctgcagatggcc
ggtgccagtggccagctcttcacagctgatcaggttgtcggtctgcttggtaaatacata
gaatcaaataagctctacgatcctttaaacaaacgcatcattcactgcaaaaacgatctg
cttggagaagtgtttcaagttgatcaatttaccgtcactgatttcaaaaatttgtggaaa
tttatttttccatgtttgtttcctgctactaagaaggaaatgtcatctaatgaacttcag
cagaatcagacatgcaatgagttacatggttgttcccaaactggtgaaagtagctcaagc
gaacttccgtggtggtattatgtgagtggaaagacaaggcatggcgaggctgatgacgaa
actgagggaggaagttatactggacgtgaaaccatcgacattcatgacgttgacagcgaa
ttcgaggaaagcgtagacgcgtgtgatggcgatgagatcttccaaggtgaatatgaacct
gtggatgaaagtgattcggatactgattcggatgatactatacctgtcacttcagatgag
gaagagaatatgccaaacattgcaagtcttcaaaagtttcagactgactctgatgatgac
accagcaccacggacctcagtatggactcagacatattactggaggaacactgggcgtgt
atcgaatgcggcacgatgaatatgccgacagtaggttactgcatgagatgctggaagcta
agaaaaggatgggtaaaagcccacgacatccaacgaagtttcaccgaaccttcgaagcca
acaaaccatcctctacccatgcatagaggctttagtttggacgtggccgatggtaggacg
cgaaccccggacggtcacacaagtgaagcaagttgttcttcacagtcgactatagttcca
accataccatcctttgccagtccgctcaagcacaagttggaagacgcgccggaaacttcg
cttgcaagcgagggaagtgagcctaagaaaatgcatcttgacgacaccttgccgacccaa
tcaatggaatctgttatgtcaagttcaagtcaagccacgacgagttccagtgaaaacaac
agttttccaggcttatgtaatatttgccggaacaacccaaacgatgccgttataatccac
agaaatatctcgcaccagttctgctgctttcgttgcgccaaacgcttaaagaaaaagggc
aagacatgtcctgtttgtagacagccgattatgcttgttattcgaaatttcatcgttcaa
ttttag
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