Clavelina lepadiformis (light-bulb sea squirt): 143452740
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Entry
143452740 CDS
T11416
Name
(RefSeq) beta-1,4-galactosyltransferase 6-like isoform X1
KO
K09905
beta-1,4-galactosyltransferase 5 [EC:
2.4.1.274
2.4.1.-]
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Pathway
clep00512
Mucin type O-glycan biosynthesis
clep00600
Sphingolipid metabolism
clep01100
Metabolic pathways
Module
clep_M00066
Lactosylceramide biosynthesis
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
143452740
09107 Glycan biosynthesis and metabolism
00512 Mucin type O-glycan biosynthesis
143452740
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
clep01003
]
143452740
Enzymes [BR:
clep01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.274 glucosylceramide beta-1,4-galactosyltransferase
143452740
Glycosyltransferases [BR:
clep01003
]
Glycolipid biosynthesis
Glycosphingolipid
143452740
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
143452740
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_7N
Glyco_transf_7C
Motif
Other DBs
NCBI-GeneID:
143452740
NCBI-ProteinID:
XP_076809920
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All DBs
Position
4:10743600..10760164
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AA seq
358 aa
AA seq
DB search
MQMVGRNYFLKPKGAVTVLLLTVTYITSYVLYFSYTTPGQANSYLYWLERKLKVRPSYVY
QGASMQEENEETYFPANLRVLSNETCPEKFYEMNGKMSVNVDEINLDKLNLQFSGKVKYG
GNWSPEDCIPKWNVGFLIPFRNRHYHLPILLRHLIPMLMIQHIKFTIYVINQEGNQRFNR
AMLLNVGYLEALKMKHHDCFIFHDVDHLPENNRNYYGCTDMPRQFRVLLDVNDYSLEYPT
FFGGVTGLTTEQFKKVNGFSNEFWGWGGEDDDLYARVNKLGYNVSSATPTRGRYSTLQKN
HHQESQNLGRFNLLTSSIERNSIDGLNSLRYQPATIETHKLFTNISVDLQPVKMLNKT
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatggttgggcggaattattttctgaagccaaaaggagcagttacagttcttcta
ttgactgtgacttacattacaagctacgtgttgtacttttcgtacaccacacctggccaa
gcaaactcatatctttactggttggaacgcaaactgaaagtgaggccaagttacgtttac
caaggagcatcaatgcaagaggaaaatgaagagacatattttcctgcaaatttaagagta
ttaagcaatgaaacttgtccagaaaaattttatgaaatgaacggaaagatgtctgtaaat
gtggatgaaattaatttagataaattaaatcttcagttttccggtaaagtaaagtacgga
ggcaattggtcaccagaggactgtattccgaaatggaatgttggattccttattcctttt
cgaaatcggcactaccatctgcccatcctgcttcgacatcttatccccatgcttatgatc
caacacataaaatttacaatttatgtaatcaatcaggaaggaaatcaacgtttcaacaga
gcaatgcttctaaatgtcggctacctggaagcactgaagatgaaacaccatgattgcttt
atatttcatgatgtagaccatttaccagaaaataacaggaattactacggttgtacggac
atgccaagacagttcagagtgttgttggatgtaaatgattacagtttggaatatcccact
ttctttggaggagtaactggattaacaactgagcaatttaagaaagtcaatggattttct
aatgagttctggggttggggtggggaagatgatgatctctatgccagagttaataaatta
ggatacaatgtttcaagtgcaactccaacacgaggcaggtattcaacattgcaaaaaaac
catcatcaagaaagccaaaaccttggaagattcaacttgttgactagttccattgaacga
aattcgattgatggcttaaactcactgcgttaccagccagcgacaatagaaactcacaaa
cttttcacaaatatatcagtggacttacaaccagtgaaaatgttgaataaaacataa
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