Clavelina lepadiformis (light-bulb sea squirt): 143452759
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Entry
143452759 CDS
T11416
Name
(RefSeq) interferon regulatory factor 4-like isoform X1
KO
K09446
interferon regulatory factor 5
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Pathway
clep04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
143452759
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clep03000
]
143452759
Transcription factors [BR:
clep03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
143452759
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GFIT
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NCBI-GeneID:
143452759
NCBI-ProteinID:
XP_076809961
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Position
4:18943428..18949451
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AA seq
527 aa
AA seq
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MESQNIVSDEQGMTIRPWLVKHTNENDYGLAWFDDKKTFIKIPWPTSVHHPDSVKDLKIC
VAWSKHRGKYSEPPAYSKIKARFRCALDKSKHFDYRQDLSETDRQFGSFRVYELKSGSKS
KDVKPKKQKRPHPHIDDHPSLNNSIEAPQCKDNLGPFGNCLIPMTSNPADPLALTQGFMQ
NIEQPVDDLYHSSLYLPTPLEANYLPVEALAKSQQNFEINEMDAEPSNQFGTSNGTIGFT
PVTPQHEKILNQKFDFVAKNPEKLAQYKMCVYYRQVGEYNVPIIEQIKENLLLDLSHSGA
RLLYGDFNTTSGFQAADEAPEQSYPLPKANTINPEIAVESTLVGKVLKNFDGGISFCMDE
KHNLKVTRHCQSQVFYFENPSINSNSIKMNQGEPIILFSLENYINELIRFSRELGAPKPE
KIIPIVIGSKPKTLTSNALVRVTFEHVLASDLEKRFGISDSLPQLAVSNPPSNASNRAAG
FLKMLEVNDSLPEFTFTRQSPNASHQLDELNSFLESLYEYANIDTAT
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggaaagccaaaatattgtcagcgatgaacaaggcatgaccatcagaccatggcttgtt
aaacatacaaatgaaaacgattatggtttggcctggtttgatgacaagaaaacatttatc
aaaattccttggccgacatcagtacatcatccagattcagtaaaagatttaaaaatttgt
gtggcctggtcaaaacacagaggaaagtacagtgaacccccagcatattccaaaattaaa
gcaagatttcgttgtgctttagacaagtcaaaacattttgattacagacaagacttaagt
gaaacagatcgccagtttggtagttttagggtgtatgagcttaaaagcggatctaaaagc
aaagatgttaaaccaaagaagcagaaacggcctcatccacatatagatgatcatccatct
ctgaacaattcaattgaagcacctcaatgcaaggataatttgggaccatttggaaactgt
ctaattccaatgacttctaacccagctgatccacttgcattaacccaaggatttatgcaa
aacatagaacaaccagttgatgatttgtaccatagcagtttatatctaccaactccgcta
gaagcaaattatttgccggttgaagctctggcaaaatctcagcaaaattttgaaattaat
gaaatggatgctgaacctagtaaccaatttggtacaagcaatggaactataggttttact
ccagttacaccacagcatgaaaagattttgaatcagaaatttgattttgttgcaaagaat
cctgaaaaacttgcccaatacaagatgtgtgtctactacagacaagttggagaatacaat
gtgcccatcatagagcagataaaggaaaacttgctgctggacctttctcattcaggtgcc
cggttgttatatggagacttcaacacaacctctggttttcaggctgctgatgaggcccca
gaacaatcttatccgctaccaaaagcaaataccataaaccctgaaatagctgtggaaagt
acgctggttggcaaagtgctgaaaaattttgatggtggcatttccttttgtatggatgaa
aaacacaatcttaaggtaacaaggcactgtcagagtcaagtgttttactttgaaaatcct
tccattaatagcaacagcatcaaaatgaatcagggtgaaccaatcatactgttttctttg
gagaattacatcaatgaattaattcgatttagtcgtgaactgggtgcacccaaaccggaa
aaaatcataccaattgttattggcagcaagcctaaaaccttgacttcaaacgctttggtt
cgagtaacatttgaacatgttctcgcctctgacttagaaaaaaggtttggaataagtgac
agccttccacaacttgctgttagtaatccaccctctaatgcatctaatcgagcggctggt
tttttaaaaatgctagaggtaaatgacagtttgccagaatttacgtttacgcgccaatcc
cctaatgcatctcaccaattagacgagttgaactcattcctagaaagtctatatgagtat
gcaaacatagatacagcaacataa
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