KEGG   Clavelina lepadiformis (light-bulb sea squirt): 143459216
Entry
143459216         CDS       T11416                                 
Name
(RefSeq) LOW QUALITY PROTEIN: small nuclear ribonucleoprotein-associated protein B-like
  KO
K11086  small nuclear ribonucleoprotein B and B'
Organism
clep  Clavelina lepadiformis (light-bulb sea squirt)
Pathway
clep03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:clep00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    143459216
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:clep03019]
    143459216
   03041 Spliceosome [BR:clep03041]
    143459216
   03032 DNA replication proteins [BR:clep03032]
    143459216
Messenger RNA biogenesis [BR:clep03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     143459216
Spliceosome [BR:clep03041]
 Complex A
  U1 snRNP components
   Sm proteins
    143459216
  U2 snRNP components
    143459216
 Complex B
  U1 snRNP components
    143459216
  U4/U6.U5 tri-snRNP components
    143459216
 Complex C
  U2 snRNP components
    143459216
DNA replication proteins [BR:clep03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     143459216
SSDB
Other DBs
NCBI-GeneID: 143459216
NCBI-ProteinID: XP_076812379
LinkDB
Position
1:complement(285542..286220)
AA seq 167 aa
MPPRGGSKLNNHINYRMRCILQDGRTFIGTFKAFDKHMNLILVDCDEFRRIRPKKGSTDR
EEKRTLGLVLLRGEHLVSMSVEGPPPSGKGLGVPGGSSRGPGAGRAAGRGMGGPGGPTAG
LQGPMHGVGGPAPGTMAPQRGGFGPXPGMSGPPPGMVRGGFGRGYNY
NT seq 504 nt   +upstreamnt  +downstreamnt
atgccacctcgcggaggttcaaagttaaacaatcatatcaattaccgtatgcgatgcatt
ctgcaggatggtcgcactttcatcggcaccttcaaagcttttgataaacacatgaaccta
attcttgttgattgtgacgagttccgtcggattcgacccaagaaaggttccactgacaga
gaggagaaaaggactctggggcttgtgcttctacgcggagaacatctggtgtcgatgtcg
gttgaaggaccgcctccatcagggaaaggactcggcgtgccgggaggttcaagtcgcgga
ccaggcgctggacgagctgctggtcgcggtatgggtggccccggtggtccaacggcggga
ttacagggacctatgcatggggttggtggaccagccccgggcacaatggcaccgcagcgg
ggcggttttggacccntgccaggaatgagtggcccgccccctggtatggtccgaggtggc
tttggtcgaggctacaactattaa

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