Clavelina lepadiformis (light-bulb sea squirt): 143459357
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Entry
143459357 CDS
T11416
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-1-like isoform X1
KO
K04858
voltage-dependent calcium channel alpha-2/delta-1
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
clep04040
]
143459357
Ion channels [BR:
clep04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
143459357
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GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
MCP-like_PDC_1
VWA_2
Motif
Other DBs
NCBI-GeneID:
143459357
NCBI-ProteinID:
XP_076812592
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Position
5:15381269..15398170
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AA seq
1197 aa
AA seq
DB search
MMIQNVLHFTKMATLLYWVVLILSVGFSSSSLGELWLQKVTQDFNRNISETVKESTAFHY
LEQEYNRLGLKVIEINRDEIINTAVINLQKLFQTAESKVKNLTEEAYLFNNATNREKKLT
NVQVRFYDKGVNETSATPNEVFKHTNRTLFYYNSKCGNGYQLPKQSPFSEDQNPVCYTPE
GGFRANLQFNGLQVSTDLSAVHIPVDVYNEGSSILRDIAWTQSMDPVFKDHFCNNDTSAK
TRWLYVATRNGVLRYFPSRQWSTPVNEIDLFDCRGESWFVQSMSSHKNVLIMIDRSGSVT
GLTLTLIKMSVQHVMSSFSENDFFNVFVFNDKVEFLNMKCPGLMQGTPVNKEAAISWLAS
IIPKNPASFSDGFAFGFNQLNFVPRNASCNPIILLFTDGGAEYPEEVFNSLNGNKTTRVF
TYSVGKHFASTGTLRQMACNNHGQFSTIPTDTATHFQTMKYLDKISKPLAIEKTELYKWS
LPYEDRLGLGTVMTVTRPIYEDYNDNNKRKLGVLGVAAADILHSDIKQIMDVSQYGLHAY
MFGTENNGFLFHHPLLRKGQLNAPTVEDLEDIEQCNMTELRKSMIDRESGETQLSRTMVS
TSYGVRHIYEAMFTYKYAPVQNSLFSVGLGIPNDKLYRIVSSGTFPSGKSTLSEINIADR
DVYTEICGMPCISADDGSSQSPCGRESSLNSADSASRKFECRSLDEIAANCTQSADNTRL
DDLLLHGHVSHILLTEKWSIATPDPIVKALFVATDGLPSLLRIRHHGDEKYRQGIERELS
NPTTKDYFQRAVLSKSVVYSLVQFPFIGDNVNVTTAPTTTVKSSTAADYDVSTACSTTAV
AQVQAARFIAVSQPFALSTEPVITPVVSGALLDYDGVKEILFNLTAQKCQSDEDCNFYHS
CLNEDQLCVVLDDAGVLVMTNQQENGKKHRVGKFFGETDKELMKALEQDGVYASVDIIQH
QEVCKRSKQKKNSASRNFFLATMTNLLKLGGWFSSSAWLSVQHFLYVLVNFPNNVFASER
RHDSGIAGSNTPHHHQAEVNAPSSLFGYYHCVRKAKVFKFGPTEIVMDGKADCFSCVRSY
VASRISETNLLFVTANITTPCSDDRNEENCLTPYPTDELWSEVSHEHACKEGRYRKTPTQ
QCYDVRNILNNDEVNDADCGAAQLELPSVFFLVFHSVFAALFSGYLPYSSLHHERQV
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
atgatgatacaaaatgtcctccattttactaagatggcaacattgctgtactgggttgtt
ctgattttaagcgttggattttcttcaagttcactgggagaactttggttgcaaaaagtc
actcaggattttaatagaaacattagtgaaacagtcaaagaatccacagcttttcattat
ttagaacaggaatataacaggttaggattgaaagtaattgaaataaaccgggacgaaatt
attaacacagcagttataaatcttcagaaactctttcaaactgctgaaagtaaagtgaag
aatttaacagaggaagcgtatttatttaacaatgcaacaaatcgcgaaaaaaagctaacc
aatgtacaagtgcgcttttatgataaaggagttaatgaaacttccgccacacccaatgaa
gtgtttaaacatacaaacagaactcttttttattacaattcaaaatgtggtaatggttat
cagctgcctaaacagtctcctttcagcgaagaccagaatccagtttgctacacaccagaa
ggtggttttcgtgcaaatttgcaatttaatggccttcaggtttccactgacttaagtgca
gttcatattccagttgatgtatacaatgagggaagttccattttacgtgatattgcctgg
acacaaagtatggatcctgttttcaaggaccatttctgtaataatgatacgtcagcaaaa
acaagatggctttatgttgcaactaggaatggcgtactaagatattttccctcacgtcag
tggagtacacctgtcaacgagattgatctttttgattgtcgtggcgagtcttggtttgtg
cagagtatgtcgtcacacaaaaatgttctaattatgattgatagaagtggaagtgtaaca
ggcctgacactgactcttatcaaaatgtcagtccaacacgtcatgagctctttcagtgag
aatgactttttcaatgtttttgtcttcaacgacaaagttgaatttttgaacatgaaatgc
ccaggattaatgcagggaacaccagtgaacaaagaggcagccatctcttggttggcaagt
attataccaaaaaacccagcgtcgttttctgatggttttgcttttggatttaatcagttg
aactttgttccaagaaatgcatcgtgcaatcccataatcctccttttcaccgatggtgga
gcagaatacccggaagaagtttttaattcactaaatgggaacaagactacgagggttttc
acgtattccgtcggaaagcattttgccagcactggaactttgcgccaaatggcttgcaac
aatcacggtcagttttccaccattcccactgacaccgcaactcattttcagaccatgaag
tatttggataaaatcagcaagcctcttgccattgaaaagactgaattgtacaaatggtcg
cttccttacgaggatcgtctaggccttggcactgtgatgacggtgactagaccgatatac
gaagactacaatgacaacaacaaacgcaaactcggtgtgcttggagtggcagctgctgat
attttacacagtgatatcaaacaaatcatggacgtgtcgcagtatggattgcacgcctac
atgtttgggactgaaaacaacggctttcttttccaccacccccttttaaggaagggtcag
cttaacgcacctactgtagaagatctcgaagacattgaacaatgcaatatgactgagctc
cgaaaatcaatgatagacagagaaagcggagaaacccagctctctcgcaccatggtctca
acatcgtatggcgtacgacacatatacgaggccatgtttacttacaaatatgcgcctgtc
caaaattccctattcagtgttgggctcggaataccaaacgacaaactatatcgtatcgtc
agcagtggtacgtttccgtctggaaaatcaactctaagcgaaattaatatcgcagatcgc
gacgtttataccgaaatatgcggaatgccgtgcataagcgcagacgatggatcttctcag
tcaccgtgtgggcgcgagtcttcattgaattcggctgattccgcatcaagaaagtttgaa
tgtcggtcactagatgagatcgctgcaaattgtacacaatcagccgacaacacacgacta
gatgacctcctgttgcatggtcatgtgtcgcacatcttgctaactgagaagtggtcaatt
gcaacaccagacccgattgttaaagccttgtttgtggctacagacggtctgccctccttg
ttgagaattcgccaccacggcgacgaaaaatacagacagggaatagaacgagaactgagc
aacccaaccacgaaggattacttccaacgagctgtcctgtctaagtccgtcgtttactcg
ctagtccagtttccttttattggcgataatgtgaacgtcacaactgcccccaccaccacc
gtgaaaagttctaccgctgcggattatgacgtcagcactgcgtgttcgacgacagctgtt
gcgcaggttcaggcggcgaggttcattgcggtgagccagccttttgcattatcaaccgag
ccggtcattacccctgttgtatctggtgctctattagattatgatggtgtcaaggaaatt
ttattcaatctaaccgctcagaagtgtcaatccgacgaagattgcaacttctaccacagc
tgcttgaacgaggatcaattgtgcgttgtactggatgacgccggggttttagtgatgaca
aaccaacaagaaaatggaaagaaacatagggttggcaaattttttggagaaacagataaa
gagttgatgaaggctcttgaacaggatggtgtctatgcctcggtcgacatcatccagcat
caagaggtgtgcaaaagatcaaaacagaagaaaaattctgcttcaagaaacttctttctc
gcgacgatgacgaatttactgaaattaggggggtggttttcgtcaagcgcgtggctttca
gtccaacatttcttgtatgtactagtgaatttccccaataacgtatttgcaagcgaacga
cgacacgacagtggcatagctgggtcgaacacacctcaccatcatcaagccgaagtaaat
gcacccagctcgttgtttggttattatcactgcgtaagaaaagcgaaagtcttcaagttc
ggcccaaccgagattgtcatggacgggaaagctgactgtttctcttgtgtgcggtcctac
gtagccagccgtatctccgaaacgaatcttctctttgtcactgcaaatatcaccacgcca
tgttctgatgatagaaatgaggaaaactgtctcaccccatacccgaccgacgaattatgg
agcgaagtttctcacgagcacgcctgtaaagagggaaggtataggaaaactcccacacag
cagtgttatgacgttcgaaatatcttgaataatgatgaggtcaacgatgctgattgcggc
gccgcccaactcgaactgccgtcggttttctttctcgtattccattcggtattcgctgct
cttttttcgggctatttgccctatagcagccttcatcacgagcggcaagtataa
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