Clavelina lepadiformis (light-bulb sea squirt): 143460372
Help
Entry
143460372 CDS
T11416
Name
(RefSeq) bile acid receptor-like isoform X1
KO
K08537
farnesoid X receptor
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clep03000
]
143460372
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
clep03310
]
143460372
Transcription factors [BR:
clep03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
143460372
Nuclear receptors [BR:
clep03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
143460372
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
143460372
NCBI-ProteinID:
XP_076813973
LinkDB
All DBs
Position
1:22629973..22635308
Genome browser
AA seq
632 aa
AA seq
DB search
MQSSQQKEEQINCSDSFNFLSIPNYCSGGNSWFQPNPNCPNHKQGVPFSAAYGNPNSEGD
VSCANCFMHSTIMQSMAMSCQHLHACSNCASCYSHNNHSPSLSSSAGMSPPLFPNGSPLS
SGSSPPLFAPVSPPESSNCSSNSCAMDVNLATAPFRNEIKIFAGEQPSVSGNDQQANSSH
QVYPQCQVSNSLPSFTVGGQRSSFTGQNRFSPAHKPVTSLPTEQPRLKETYQESSKSQRL
VSSESFSSDVTEVNKPTEIKQEHTTIIQNRKRGANDVCEVCGDRASGYHYNALTCEGCKG
FFRRSINKKEPPYKCKYGGACEMDTYTRRKCPDCRLRKCKAVGMLEECLLTEIQCQSKRR
SRKTKRTAANEKQTTSKDTSSSASQSPSSSQPSPVDNKSYESTKQVPPVEANPEQDRLVR
YVGNAFHHYRSSPEVVKRWEMYLEKTQKTNLCEIATAHVRVLVEYTKQLPGFTRLGPEDQ
IALLKGSVVEIMLLRNACGYNFKNSQIDISLFVKDTGLHEAKVRGLLSFFAGIKHLALDE
REYGLLAAIILFDSDYPHTQDKARIDRYRETYISALSYYSVKRDPRRTQIVAKILNLITK
LRTLYHTYARMVSNLKEKEQFSPLLCEIWDLS
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcatcccagcaaaaggaagaacaaattaattgctcagactcctttaattttttg
tcaattccaaattattgcagtggaggaaacagctggtttcagcctaacccaaactgtcct
aatcacaagcaaggtgtgccgttcagtgcagcctacggtaatccgaattcagaaggtgat
gtttcatgcgccaattgcttcatgcattccacaataatgcaatcaatggctatgtcgtgc
cagcatctgcacgcgtgttccaactgcgcaagttgctattcacacaacaaccattctccg
tccctgtcttcgtcggcaggaatgtctccgcccttatttcctaatggaagtccgttgtca
tccggatcttctccaccactttttgcacccgtaagtccgccggaatcgtcgaactgttca
tccaacagctgtgctatggacgtaaatcttgcaactgcccctttccggaatgagataaag
atctttgcaggagaacaaccttcggtttctggaaacgatcaacaagcaaactccagtcat
caagtttatccccagtgtcaggtttcgaattcacttccttcatttacggtgggaggacaa
cgatcctcatttactggacaaaaccgattttctcctgcgcacaaacctgttacgtcattg
ccaacagaacaaccaaggttgaaggaaacctatcaggaaagttctaagtctcagcgcttg
gtttctagtgagagtttcagcagcgatgtaacggaggtgaacaagccaacagagataaag
caagaacacaccactattattcagaatcgaaaacgtggcgcgaatgacgtatgtgaagtt
tgtggcgaccgcgcatcaggttatcattataatgcattgacgtgcgaaggttgtaaaggt
tttttcaggcggtcaatcaacaagaaggaacccccttacaaatgcaaatacgggggcgca
tgtgaaatggacacctacaccagacgaaagtgtcccgactgtagactgaggaaatgcaag
gcagtcggcatgctcgaagaatgtctcctgactgagatccagtgccagtcgaagagacga
agccggaagacaaaaagaaccgcagccaacgaaaaacaaaccactagcaaggacacaagc
tcatctgcgtctcaatcgccatcatcgtcgcagccatcgccagtggacaataaatcatat
gagtctacaaaacaggtaccacctgtcgaagccaaccctgagcaggacagacttgtgcga
tacgttggaaacgcatttcaccattaccggtcgagtcctgaggtcgtaaaacgatgggaa
atgtacctggagaaaacgcaaaagaccaacctgtgtgagattgcgaccgctcacgtgcga
gttttggtggaatacacgaaacaattaccaggatttactagacttggtcctgaagatcag
atagctcttctcaaaggaagtgttgtcgagataatgctgcttagaaatgcatgcggctat
aacttcaaaaacagtcaaatcgacatttccctctttgtcaaagatacaggtcttcatgaa
gcgaaggtccgagggttactcagcttttttgccggaattaaacacctggctttggatgag
agagaatacggcttacttgctgcgatcattctcttcgattcagattacccccatacgcaa
gataaggcgcgcatagatcgctacagggagacctacatctcggcgctctcatactacagc
gtgaagagggatccgcgtcggacacagatcgtcgcgaaaatcctcaacctcatcaccaaa
ctccggactctgtaccacacttacgccaggatggtgtcgaatcttaaggaaaaggaacaa
ttttcaccgctcctctgtgaaatatgggatctgtcttga
DBGET
integrated database retrieval system
