Clavelina lepadiformis (light-bulb sea squirt): 143461001
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Entry
143461001 CDS
T11416
Name
(RefSeq) receptor-type tyrosine-protein phosphatase F-like isoform X1
KO
K05695
receptor-type tyrosine-protein phosphatase F [EC:
3.1.3.48
]
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Pathway
clep04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
143461001
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
clep01009
]
143461001
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
clep04515
]
143461001
Enzymes [BR:
clep01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
143461001
Protein phosphatases and associated proteins [BR:
clep01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
143461001
Cell adhesion molecules [BR:
clep04515
]
Immunoglobulin superfamily
Type II RPTP family
143461001
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Y_phosphatase
fn3
Ig_3
I-set
FN3_DSCAM-DSCAML_C
Fn3_ROS1
Ig_2
Pur_ac_phosph_N
Fn3_VIN3
ig
Fn3_PBP1
PTP-SAK
Tc-R-P
DSPc
Ig_Rha78A_N
C2-set_2
Y_phosphatase3
fn3_SORL1
PTP-NADK
Fn3_PTPRU
Fn3_SaeA_3rd
DUF8194
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
143461001
NCBI-ProteinID:
XP_076814845
LinkDB
All DBs
Position
5:complement(7917971..7954398)
Genome browser
AA seq
1979 aa
AA seq
DB search
MQRIVLTALLLGIALMADGRKRKFRQSREAAPHIVDHPPSQTGLSKGIIALVCNATGNPR
PRIEWLKDGKAVSTHRYEIHDYNYGDVVGSVLWVSSARKRKDAALYTCRAFNRVGTEEAS
ARIDLIDENSKPSGFPYIDVNPTVKTVEKSRSLILDCAVGGTPQPDVIWYKDYKPLYIDG
TRITMAPAGTLNILSSNDSDQGKYHCSAQNHFGTIFSEGANVFVRVRRVPPRFSISPRKS
YDVLQNGDVEIVCVAVGAPMPYVKWQIETPDGPFQVLPVSADRPKVGRLVLSLKNVKESA
NYTCVATSVISSIKFTTEVRLKALPKPPLDMRSSEFGNTAHMIRITWRSGDLEPVDSYTL
YYRRRFSNGPYDSFTQISSTSFSVSGLDPYVYYEFRVSAINGQGEGNMSKPFYVRTNEAV
PSDAPEILTAYMVGVNIVMLSWSPPVQPNGRITSYKVYYTSTPSLPISGWEVLPIGDRQQ
VASVRNLARQVTYSFRVAAENSAGEGPTSETALVKTVQGVPAQPRNFRGRAESSTSIRLQ
WNRPTEEESKGIDIKSYIMYYNCNGSACSSIEKRITFDPTDEYALTNLNPNSVYRIRLAA
QSVRGEGIVTPTIAVKTLSDVPSAPPQNVDAFSVDENSILVEWKTPLKENHNGRLTRYTV
YYAMKSDEAASSQYSTNPNVTSTIIKGLTPFTTYDVRVSAWTEVGEGPSSAVAAVTTAES
TPGRSPSSVQLYAINSTSVRVRWSPVRRQNLHGNLRGYQVAYEDVVSGRNFIVNTDEDLR
GSGSDQALCRRKHSLRRWEKCRQNNLLEFVLSGLRSRTRYSVSVAAFTVKGNGPFSEAQY
VTTRGKVPSAPSLSVTKSNEGKAYVGWEIPESTFGNIISYALSYRCIDCTDEQGGTEWTT
RRFDESQTYHTPKDVIPGWRYEFKLAASNSEGLGANSTITISLPSLKPSDAPRGLSGETL
PEPPKRDGSPPDHKFGIKLTWLPLPHDVSNGPITGYALYSGASTLTTGDYTRSITDKNFY
WFRAVLPEEKYEFQVAALTSAGEGPKSPPVILTVSEKPTDQNVTVNNFEALEASSTTVWL
QWVAPSFIENPKFTISYQFASSGQTENKDTMNEEIAISGLTPGMGYTFTITMSGRYKEQE
MLFGSSKTSARTTPRLMGYGPLARNVTEQGTVEVILTRATNTLNVEKYSLVVVPVESNSS
VDELMKPDSFSQYKLIANSNTLRRRRRRQVILPQPYIAAEFEVISIQKAFVVGDARNHGG
FVNKPLLAGQSYRIFVRAVLTTQETAYTSSPYSGEIHIPGSTASPAPSSVTPNGRGGPKE
LPVTSDSMWVIGPIVAAIALIVAIVAVICIKRKRGKQGSPKVKYTAPVAKHSNSNKRVEH
DPVELRRQNCQTPGMMSHPPIPVAEMAAHVERLRANDNLKFSQEYESIDPGQQFVWEHSA
LEVNKSKNRYANVIAYDHSRLTLSPIDGVPGSDYINANYISGYRRQNAYIATQGPTRETS
HDFWRMVWEQRSSVIVMMTKCEERSKVKCDQYWPLVGSETYGLMKVTLIDEMELATYCVR
TLALFKNGSNDRREVKHFQFTAWPDHGVPEHPTPVLNFMRRVKTSYKSQPEGGPMVVHCS
AGVGRAGCFICIDSMLERMGHENSVDIYGQVTCMRAERNYMVQTEDQYIFIHDALLEAIN
CGNTELSAHNLFNHLHKLTSPEGDSPVTGMEMEFKRLASQKALAARFVSANLPCNKFKNR
LVNILPYEITRVCLQPMRGVEGSDYVNASFIDGYRQKRAYIATQGPLPETTEDFWRMLWE
HNSTIVVMLTKLRESGRDKCHQYWPAERSARYQYFVVDPMSEYSMQQYILREFKVTDARD
GQSRTVRQFQFTDWPEQAVPKSGEGFIDFIGQVHKTKEQFGQEGPITIHCSAGVGRTGVF
ITLSIALERMRFENLVDMFQTVKMLRTQRPAMVQTEDQYQFCYRAALEYLGSFDHYATA
NT seq
5940 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgaatagtgttaactgcattgctgctaggcattgcgcttatggctgatggccgt
aaaaggaaatttcgtcaatctcgtgaagccgcccctcatattgtggaccatccaccatct
cagactggattaagcaaaggaatcatagcattggtgtgcaatgcaaccggtaatcctcgt
ccaagaatagaatggttaaaagacggtaaagcggtgtcaacacatcgctacgaaattcat
gattacaactacggcgacgtggtgggatcagttttgtgggtgtcgtcggcaagaaagcgg
aaagacgccgccctttacacttgcagggctttcaatcgtgttggcaccgaggaagcctct
gctaggattgatctgattgacgaaaactcgaaaccttccggttttccatacatagacgtc
aacccgactgtaaagacagtggaaaaatcacggtcacttatattggactgtgcagttggg
ggaactccccaaccagacgttatctggtacaaggactacaagcctctttacattgatggg
actagaataacaatggctccggcgggcacactcaacattctgagcagcaacgattccgac
cagggaaaataccattgctccgctcaaaaccactttgggaccatattctcggaaggggcc
aacgtctttgtccgtgttcgacgagttcctccgagattttctatttccccgagaaagagt
tacgacgttttacaaaacggcgacgtggaaatcgtttgtgttgctgttggcgcgcccatg
ccgtatgtaaaatggcagatagaaacacccgacggtccattccaggtgctaccggtcagt
gcggatcgcccaaaagtgggtcggttagttctatccttgaagaacgtcaaggaatcagcc
aattatacttgtgttgcaacctcagtgatcagttccatcaagtttacgactgaagttcgt
ttgaaagccctacccaagccacccttagacatgcgtagctcagaattcggcaacacggcg
catatgattcggataacttggagatctggggatctcgaacccgtcgacagctataccttg
tactacagacgacgatttagcaacggtccctacgattctttcacgcaaatctcgtccaca
agcttttctgtttctggtctggatccgtatgtttactacgaatttcgagtatctgcaatc
aatgggcaaggagaaggcaacatgagcaagcctttctacgttaggaccaacgaagccgtt
ccaagtgacgcccccgaaatactgaccgcctatatggtcggagtaaacatcgttatgctc
tcgtggagccctccagtccaacccaacgggagaataacatcctacaaggtttactacacc
agtaccccttcactgccaatatcagggtgggaagtactgccgatcggcgacagacagcag
gtcgcttcggttcggaatctagccaggcaggtcacatacagcttccgggttgcggcggaa
aactcagctggggaaggcccgacatcggaaacggcgttggtcaaaaccgtccaaggagtt
cctgcacaaccacgaaatttccgcggaagagccgaatcttcgaccagcatccggctgcag
tggaatcgtccgacggaggaagaatccaaaggaatagacatcaaaagttacatcatgtat
tacaactgcaacggttctgcctgttcgtcgatcgaaaaacgaatcactttcgatccaact
gatgaatacgctctgactaatcttaacccgaactcagtttatcgcatcagacttgctgct
caaagcgttcgcggtgaaggcatcgtgacacccaccatagccgtgaagaccttgtctgac
gttccctcagctccgccgcaaaacgtggacgcattctccgtcgacgaaaattccattctg
gttgaatggaagacacctctcaaagagaaccataatggtcgcttgaccagatacactgtc
tactatgctatgaaaagcgatgaagccgcttcgagccagtattcaactaatcctaacgtt
acatctaccataataaaaggcctaactccgtttacaacgtacgatgttcgtgttagcgct
tggaccgaggtcggagaaggtccatccagcgcagtagctgctgtaaccaccgcagaatca
actcctggaagatctcccagcagtgttcagctgtatgctattaattcaacatctgtccgc
gttcgttggtctccggtgaggagacaaaacctccacggaaatttaagaggatatcaggtc
gcttatgaggatgtggttagtgggcggaatttcatcgtgaatacggatgaggatctgagg
ggatcaggatcagatcaagcgctgtgtcgtcgcaaacattcacttcggagatgggaaaaa
tgtcgacagaataacttattggagtttgttctcagtggtctgcgttcaaggacgcgatac
tcggtgtcagttgccgcattcacggtgaagggaaacggaccattcagcgaagcgcaatac
gttactaccagaggcaaagttccatctgccccatcgttgtcagttacaaaatcaaacgaa
ggcaaagcgtatgtgggatgggaaataccagaatccacgtttggtaatatcatcagctat
gccctaagctacagatgtatcgactgcaccgacgaacaagggggaaccgaatggaccact
cgtcgatttgatgaaagccagacatatcacacgccgaaagatgtaatacccggatggagg
tacgagttcaaactggcagcatccaactctgaaggtttgggtgccaactccaccatcaca
atatccttgccttctcttaaaccttcggacgcgccccgcggtttgagcggagaaaccctt
cccgaacccccgaagagagatggcagtcctcccgatcataaattcggaattaaattgacg
tggcttcctttgccacatgatgttagcaatggcccgatcaccggctacgccctctactcg
ggagcgtcgaccctgactacgggagattacactagatccattaccgacaagaacttttat
tggtttcgggcggttttacctgaagagaagtacgagttccaggtagcggcgttaaccagc
gcaggcgagggcccgaaaagtccaccagtgatacttactgtgagcgagaaacccactgac
cagaatgtcacggttaacaactttgaagcgctcgaagcgtcctccacgaccgtttggctt
caatgggtcgcaccaagctttatagaaaatcctaaatttacgatttcataccaatttgca
agttccggtcagaccgaaaacaaagataccatgaatgaagagattgcaatctccggactt
actcctggaatgggatacaccttcactatcacgatgagcggaagatacaaagagcaagaa
atgttgtttggatcatccaagacatcagcgcgcaccactccacgactgatgggttatggt
ccgctagcaagaaatgtgacggagcaaggaacagtcgaagtcatattaacccgggccacg
aatacacttaatgtggaaaaatattcgctggtcgtagtacccgtggaaagcaattcgtct
gttgatgagttaatgaaaccggattcgttcagtcaatacaaactcatagcaaactccaac
acgttgagacgaaggcgtcgacgtcaggttatattgccacagccgtacattgccgccgaa
tttgaagtaatttctatacaaaaagcattcgtagtcggtgacgctcgtaatcacggaggt
ttcgtcaacaaaccacttctcgcggggcagagttaccgcatctttgtcagagcagtcttg
acgacacaggaaacagcatatacttcgagtccatattccggggagatccacatcccggga
tccacggcatcgccagctccgtcttccgttactccaaatggccgtggaggtcctaaagaa
ctccctgtcacttcagacagcatgtgggtgatcgggccgatcgttgccgccatcgctctc
atcgttgctatcgttgccgtcatttgcatcaagaggaaacgcgggaagcaggggtcgcct
aaagtcaaatacacggcaccagtcgccaaacacagcaactctaataagcgcgttgaacac
gaccctgtcgaattgcgacgacaaaactgccagacaccaggtatgatgagtcatccgccg
atccccgttgcagagatggctgcgcacgtggaaagactcagagctaacgacaacctaaag
ttctcgcaagagtacgagtcgatcgatccgggccagcaatttgtgtgggagcactcagcc
ctcgaggtgaacaaatccaagaatcgatacgcgaatgtgatcgcttacgaccactcgcgg
ctgacactttcaccgatagatggcgtgccaggttccgattacatcaacgccaattacata
agcgggtacagacgtcagaacgcttacatcgccacccagggaccgactcgagaaacgtca
catgacttctggaggatggtttgggagcagagatcttccgtgatcgtcatgatgactaaa
tgcgaggagagatcaaaggtaaaatgtgaccagtactggccattagtgggcagtgaaacg
tacggtctcatgaaagtgacattgattgacgagatggagttggccacttattgcgtcaga
acactggctctcttcaagaacggttcaaacgatcgacgtgaggtaaagcatttccaattc
actgcctggccagaccatggagtgccagaacacccgacccctgtccttaacttcatgcga
cgggtcaagacgtcctacaagtcccaaccagaagggggacccatggttgtacactgcagt
gcgggagtcggcagagcgggttgctttatttgcatagacagcatgctggagagaatgggt
cacgaaaactctgttgacatttacggccaagtcacgtgcatgcgagcagagaggaattac
atggtacaaaccgaagaccaatacatcttcatccacgacgctttattagaagcgatcaat
tgcggtaacactgaactatcagctcacaacctcttcaaccaccttcataaacttacatcg
cctgaaggagatagcccagtgactggaatggagatggaatttaagcgtctagcaagtcag
aaggcattggcagcccgttttgtcagtgccaatctcccctgcaacaaattcaaaaaccga
ttggtcaatattcttccatacgagataactcgtgtttgtttgcagccaatgagaggcgtt
gaaggctctgactacgtcaacgccagtttcattgatggttacagacaaaaacgcgcctac
atcgccactcagggtccgttgcctgaaacaacagaagatttctggcgaatgctgtgggaa
cataactccactatcgtagttatgctgactaaactgagagaaagtggacgagataagtgt
catcaatattggccagctgaaaggtcggcgcgctaccagtacttcgtagtcgacccgatg
tccgaatatagcatgcagcaatatattttacgcgaatttaaggtaaccgacgcaagagac
ggccagtcgcgcacagtacgccagtttcaatttacggattggccagagcaggcggtgccg
aaatccggcgagggctttatagatttcatcggacaagtccacaaaacaaaagaacaattt
ggacaagaaggcccgatcactatacactgcagtgccggtgtcggacgaactggcgttttt
atcacgttaagcatcgctcttgagagaatgcggttcgaaaaccttgttgacatgtttcag
actgtcaaaatgttgagaactcaaagaccggcaatggtgcagaccgaagaccaataccag
ttttgctaccgggcggcccttgagtatcttggttcttttgatcattacgccactgcttaa
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integrated database retrieval system
