Clavelina lepadiformis (light-bulb sea squirt): 143461826
Help
Entry
143461826 CDS
T11416
Name
(RefSeq) biotin--protein ligase-like
KO
K01942
biotin---protein ligase [EC:
6.3.4.9
6.3.4.10
6.3.4.11
6.3.4.15
]
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Pathway
clep00780
Biotin metabolism
clep01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
143461826
Enzymes [BR:
clep01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.9 biotin---[methylmalonyl-CoA-carboxytransferase] ligase
143461826
6.3.4.10 biotin---[propionyl-CoA-carboxylase (ATP-hydrolysing)] ligase
143461826
6.3.4.11 biotin---[methylcrotonoyl-CoA-carboxylase] ligase
143461826
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
143461826
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPL_LplA_LipB
BPL_N
Ntox28
BPL_C
Motif
Other DBs
NCBI-GeneID:
143461826
NCBI-ProteinID:
XP_076815831
LinkDB
All DBs
Position
6:complement(3229829..3234434)
Genome browser
AA seq
609 aa
AA seq
DB search
MSALLSRFVHPRMLNSFLSKNRTSGSEFALINKTAGFGRVQVDRQASNTNPKPPNILIYC
PGHGSQLPRYVDAVESCLSPDQYTVYPITSAKFASDPWIENTAALIISPHGGIKNEREIR
RHVDEYLKVGGKVLSFDVTFIEDVSIKSTDEFKVLDFGSELDCVLTKSDQNLSLPCKLWS
GKAIYADKPLTQLIQVRFNGKTYSVAVSDSNSNHCIASTLSSLNENEGSSQRILSYLLHH
LGLKTNWNQTLDLYHKRNESVGFLFSKPESKCYQFLNRVIKDFAPQNTVHVSGLAFIPSS
SYNDKEHEHICSDSEQFPVIFPSPETQNSELAKKCSFNWKVYFSNLSTRALGQIVLYADV
ISSTMQVFDGILLNLTSEYGVIAIARQQTKGQGRSTNKWLSPVGCAMFTLPVIIPINSYL
GHRLPFLQHMMSVAVVHAIRMLDGVENVDLRVKWPNDIYFGTSIKLGGVMVKSTVIGDSC
IASIGCGVNIANSKPTVCVNDILREKYSIDKILTCQEVIALTVTQLENIIEDFQQNGPET
FLKLYYKYWIHRNSEVEVQVDESLVASTIVGVDDCGFLLARRHDNGDVMSLQPDGNTFDI
TRNLIAAKR
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcactgctttctcggtttgttcaccctagaatgttgaactcatttttgtctaag
aacagaacctcaggttctgaatttgcacttattaacaaaactgctggtttcggaagagtg
caagtcgaccggcaagcttcaaacacaaatcctaaacctccaaatatactcatatactgc
ccaggacatggcagtcagctgccacgttatgttgatgctgtagagagctgcttgagccca
gaccagtacacagtttatccaattacttcagccaaatttgcatccgacccgtggatagaa
aacacagcggcactcataatatcaccgcatggcggtatcaaaaatgaaagggaaatcaga
agacatgtggatgaatatttaaaagtcggtggaaaggtgttatcttttgatgttacgttc
attgaagatgtctcgattaaatccaccgatgagtttaaagtgttagactttggcagtgag
cttgactgtgttttaacaaagtcagatcaaaatttgtctctaccatgcaaactatggagt
ggaaaagccatttacgctgacaagccactcacacaactgattcaagtcagattcaatggc
aaaacgtattctgttgctgtcagcgattcgaattctaatcattgcattgcttctactcta
tcatcgttgaatgaaaatgaaggttcatcacagaggattctctcttatcttctccatcat
cttggactgaaaacaaattggaatcaaacactcgatctataccataagagaaatgaatcg
gttggatttttattttcaaaaccagaaagtaaatgctatcaatttttgaacagagtgata
aaagattttgcaccacaaaacacagtccatgtttccggattagcgttcatcccttcatca
tcgtacaatgacaaagaacatgagcacatctgcagtgatagtgagcagtttccagtcata
ttcccgagtcctgagacacagaattcagaattagcaaaaaagtgttccttcaactggaaa
gtttatttttctaaccttagcacaagagcactcggtcaaattgttttatatgctgatgtg
atatcatcaactatgcaagtgtttgacggtattctgctcaatttgacttcagaatatgga
gtaattgcaatcgcaagacaacaaacaaaaggccagggtagaagcacaaataagtggctg
agtcctgttggttgtgcaatgttcacattaccggtgatcatacccattaactcatacctt
gggcaccggctcccttttctccaacacatgatgtcagtggctgtagtccatgcaattagg
atgcttgatggtgtagagaatgtggatctcagagtcaaatggccaaacgacatctacttt
ggaacatccatcaagcttggaggagtgatggttaaatctacagtgatcggagacagctgc
attgcctccattggttgtggcgtcaacatagcgaatagcaagcccacagtgtgtgtgaat
gacattctgcgtgaaaaatactccatagacaaaatcttgacttgccaagaagttatagca
ctcaccgtaactcagttggaaaatatcattgaggatttccagcaaaatgggccagaaaca
tttctgaaactttactacaaatactggattcacagaaacagcgaagtcgaggtacaggta
gatgaatctcttgttgcatccaccatcgttggtgtggacgactgcggttttcttcttgct
cgtcgccatgacaacggtgacgtcatgagtctgcaacctgacggaaatacttttgacatc
accagaaatcttatagcggctaaacgctaa
DBGET
integrated database retrieval system
