Clavelina lepadiformis (light-bulb sea squirt): 143464834
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Entry
143464834 CDS
T11416
Name
(RefSeq) U8 snoRNA-decapping enzyme-like isoform X1
KO
K16855
U8 snoRNA-decapping enzyme [EC:
3.6.1.62
3.6.1.64
]
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Pathway
clep00230
Purine metabolism
clep01100
Metabolic pathways
clep01232
Nucleotide metabolism
clep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
143464834
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
143464834
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clep03019
]
143464834
Enzymes [BR:
clep01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.62 5'-(N7-methylguanosine 5'-triphospho)-[mRNA] hydrolase
143464834
3.6.1.64 inosine diphosphate phosphatase
143464834
Messenger RNA biogenesis [BR:
clep03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
143464834
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Ortholog
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GFIT
Other DBs
NCBI-GeneID:
143464834
NCBI-ProteinID:
XP_076818964
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Position
7:complement(13290607..13296506)
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AA seq
212 aa
AA seq
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METAHDLKRKAPWNDGAYYVTNKNKATIDCKQRKVAAHAFLYCGTTALLFGSIPMRYAIM
MQLRFDGKLGFPGGLIEEDEVTVVGMNRELSEEIGLAKRFYLDEENYSASWVSPTLVDHF
YIKEYSEEDFKEIEAGVLLAKDWGGETLGIVRVPVHSLHHNLSRKFTEALVPFLQNNFIA
SAREEMIEGILARGILTKDRMTAIWMEAQQPV
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atggagacagcacatgatcttaaaagaaaagcaccatggaatgatggtgcctattacgtg
acaaacaaaaacaaagccacaattgactgcaaacagcgcaaagtagctgctcatgcgttc
ttgtattgtggtactactgcacttttatttggaagtataccaatgcgctatgcaataatg
atgcaacttcgatttgatggcaaattaggatttcctggtggtttgatagaggaagatgag
gtgactgtggtaggcatgaatcgtgagctttctgaggaaattggcttggctaaacggttc
tatcttgatgaagaaaactactctgcttcttgggtttcaccaaccttggtggatcatttc
tacataaaagaatattctgaggaagacttcaaagaaatagaagccggtgtgttgttagca
aaagattggggtggagagacactgggaatagttcgagttccagttcactcgcttcaccac
aatctatcgaggaagttcaccgaagctcttgtcccttttttgcagaataactttattgct
agtgcaagagaggagatgatagaaggaatattggcaagggggattttaactaaagatagg
atgacagccatttggatggaagctcagcaaccagtttga
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