Clavelina lepadiformis (light-bulb sea squirt): 143465084
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Entry
143465084 CDS
T11416
Name
(RefSeq) toll-like receptor 9 isoform X1
KO
K05404
toll-like receptor 7
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Pathway
clep04142
Lysosome biogenesis
clep04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
143465084
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
143465084
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
clep04054
]
143465084
Pattern recognition receptors [BR:
clep04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
143465084
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_14
TIR
LRR_5
TIR_2
LRRNT
LRR_Zer-1
LRR_At5g56370
LRR_9
Motif
Other DBs
NCBI-GeneID:
143465084
NCBI-ProteinID:
XP_076819348
LinkDB
All DBs
Position
7
Genome browser
AA seq
1073 aa
AA seq
DB search
MGWLLILLLKFLLFCRGSSRNVLNPCDEVDSVPGIYLRSKFAFSPMEDVVEKEVYLKVAP
WLDNNFVYINCSWRGLTEVPRNLPTNVEALNLGFNEIRRVGASDFLSYPNITWLIFNANC
LPVLFETAILPPCNSDLHIEPGALQHLAHLKFLGLADNNLREFPRQLPTSIKGLDISFTL
LGDVTAQLRLLSGLSILISAGNCDHYRNVCPKNFTLTQALSSSLQILDLNSNDWKMIPGY
LLGNQLKIFTLSLNPYRRLRTNDFVNATSLEVLVLNIIACTTRKALIIEDGVFDPLPHLK
YLNLSLNAVQFLPCGIFKNNKNLEILDLSCNSLKLTIFEPTYLVNLQKLRYVDLSTNNMA
SSESASFVTAVKLLRLGQTFASLSSLEKIYFGNDEMALNAILYSVQFYEIDNQSFAKLSN
LTHLSTIDISCCNVEHISSDAWSGLRHLKSIRAWNNQLTFRGNILRKGKSPILEAKTLQK
QFIFPGNLHEQDNTIERFKIPVLECDDNSLLDYSNNQITTISEQKELLLSTTTILDLSHN
QIRAIRSDDLKHLINLCSIDLSHNPINKIDPFTFSSLSSLRRIDFVEEHSDIALDFSFLL
HLNPSSQIKLKWWMPDCTVPVNFEALSELDENTSLLELDITQNDLGCKSTYTGKGLFKFM
PKLKSLVLRNCEIDSFILHYLLQGLNHLEILDLSHNNLAIFPSTSLKILNQLHSLNLDFN
NIIDLNGNLTVCPNLKHFTIAHNQIKFIQPGFFLHLKLEIIDLSHNFINQLDSSIFGKDL
LNSLQYLDMRWNELDCFCHEWQKFYRWYNSDASDNTMLPGFYPECTSDIDQYYGGCVACH
SPLNLRGRSVSRYGFNTSCDLQTHLKYTIVFTIFFVLFMFCGSFGYSKWFKRLIFRKINE
YFRVQALKPSDVSSRYSAHEGKKAFVFFDHSNEELGDWVDDKLVPGMISGNPSIELLLAG
RDIDAGMSPNENLLRLITKSRKTIVIFSGNFCDTPTCKFVLPALQELQHSAGRDQLILVE
WHGEEPARVPELIHRTFNRKFYNFLRFDQTNDDEVMFFETLRTAFASSSTLDD
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atgggctggttgcttatattgttgttgaaatttcttttgttttgtcgtggatcgtcaaga
aatgtcttgaatccctgcgatgaagtagacagtgtgcctggaatatatttgcggtcaaag
ttcgccttttccccgatggaagatgtcgtcgaaaaagaggtgtatttaaaagttgctcct
tggcttgataacaattttgtttacattaattgctcgtggcgaggactaacagaggttcct
cgaaatttgccaactaacgtggaagcattaaatctcggatttaatgagattcgacgagtt
ggggcgtccgattttctttcatatccaaatataacttggttaatttttaatgcaaattgc
ctacctgtattatttgaaaccgccatattgccaccatgcaatagcgatctacacattgaa
ccaggcgcgttgcaacatcttgctcatttgaaattcttgggattggctgataacaatctt
cgtgagtttccgcgacaactaccgacttctataaagggattggacataagtttcacccta
cttggtgacgtcaccgcacaactgaggctgttatccggcttgagtattctaattagtgcg
ggaaattgtgatcattatagaaacgtatgtccaaaaaacttcacattaacgcaggcatta
tcttccagtttacaaattctggatttgaatagcaacgactggaaaatgataccgggatat
ttacttggaaaccaactaaaaatttttacgctttctttgaatccctaccgccgtttgaga
acaaatgattttgtgaatgcaacaagcttagaagtattagttttgaacatcattgcttgt
accacacgcaaagcgctaattatagaagacggtgtgtttgatccactcccacatctcaag
tacctcaatctttccttgaatgcggttcagtttttaccgtgcggaatatttaaaaacaac
aaaaatcttgaaatcctggatctttcttgtaatagtttaaaattgacaatattcgaacca
acgtacttggtcaatctacaaaaactacgatatgttgatttgtccacaaacaacatggct
tcttcggaatcagcaagctttgtaacggcagtcaaattacttcgtttgggacaaactttt
gcttctttgtcttcgcttgaaaaaatatatttcgggaatgacgaaatggccctaaatgca
atcctatattctgttcaattctatgaaatcgacaatcaatcctttgctaaattatcaaac
ttaactcatctatccacaatcgatatctcctgttgcaatgttgagcacatttcctctgac
gcatggtctggattacgtcatcttaaatccatcagagcctggaacaatcaattgactttt
cgtggcaacattttacgcaaaggaaaatctccaattttagaagcaaaaactttacaaaaa
caatttatttttccaggaaatcttcacgaacaggacaacacaattgaacgttttaaaata
ccggtcttggaatgcgacgacaacagtttacttgattattctaacaaccaaattacaacc
atatctgaacaaaaagaacttctgttatcgacgacaactattcttgatttatcacacaac
caaataagagcgataagatcagatgatttgaaacacctgataaatttgtgcagcatcgat
ctgtctcataatcctattaacaaaattgatcctttcacttttagcagcttatccagtctt
cgtcggattgactttgttgaggaacactccgacatagctcttgattttagttttctattg
catttgaatccttcttcccaaattaagttgaaatggtggatgccagattgtacagttcct
gtaaatttcgaagcattaagtgaattggatgaaaacacatcactgttggaacttgatata
acgcaaaatgatttgggttgtaaatctacatatacaggaaaaggtttgtttaagtttatg
cccaaactcaaatcccttgtacttagaaattgcgagattgattcgtttattttgcattat
ttgttgcaaggtttaaatcatcttgaaatcttggacttaagccataacaacttggcgata
tttccttcgacatctttaaaaatcttgaaccagttgcattccttaaatttagatttcaat
aatatcattgatctaaacggaaacttgaccgtttgccccaacttgaaacattttaccatc
gctcataaccaaatcaagtttattcaaccaggattctttttgcatttgaaacttgaaatc
attgatctcagtcacaacttcataaatcaactggactcaagtattttcggcaaagatttg
ttgaattcacttcagtatttagacatgagatggaacgaacttgattgtttttgtcatgaa
tggcagaaattttatcgttggtataattctgatgcaagtgacaacaccatgcttcctggc
ttttatccagaatgcacttcggacattgaccaatattatggcgggtgtgtggcgtgccat
tccccgctgaatttgcgtggtcgctctgtgtcgcgatatggatttaacacatcgtgtgat
ttgcagacacatctcaagtacaccatcgtattcacaatattctttgtattattcatgttt
tgcggcagttttggttatagcaaatggttcaagagattgatatttcggaaaatcaatgaa
tatttcagagttcaagcattgaaaccaagcgatgtttcttcaagatattctgcacacgaa
ggcaagaaagcttttgtattctttgaccacagtaatgaggaactgggtgattgggtggat
gataaactggtacctgggatgattagcggaaacccttccattgaacttctcttagctggt
cgtgatatcgatgctggtatgtctccaaatgaaaatcttctccgtcttatcacgaagagt
cgaaaaacaatcgtcatattttctggcaacttttgcgacactccgacctgcaaattcgtg
ttgccggcgctccaggaacttcaacactctgccggaagagatcaactgatattagtggag
tggcatggtgaagaaccagctcgcgttccagaattaattcatcgaactttcaaccgaaaa
ttttacaacttcctgagatttgatcaaacaaatgatgacgaagtgatgttcttcgaaaca
ctgcgaactgctttcgcgagcagcagcacactggacgattaa
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