Clavelina lepadiformis (light-bulb sea squirt): 143468676
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Entry
143468676 CDS
T11416
Name
(RefSeq) short transient receptor potential channel 5-like isoform X1
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
clep01009
]
143468676
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
clep04040
]
143468676
Protein phosphatases and associated proteins [BR:
clep01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
143468676
Ion channels [BR:
clep04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
143468676
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
143468676
NCBI-ProteinID:
XP_076822126
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Position
8:16416586..16439212
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AA seq
990 aa
AA seq
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MPKEQSKPKRVPFGGLKEASIKSAFQLPTFITLPGFSVKDSKPTSPTGFDPGARVKRVQP
SRRNSVACALFGTRRRPTDSPISRAIRQERESLKRNSLPCISTLSVLRQHHSGSLDFPDT
EENDTVSSSNINFNLDYNDVGSSSNRPSSTTALSRKIGRARTKIESVTRIMSKKSIDDKQ
EGSLPASLARRVNINLPWMISSHGCGELNKHELQLLQYSAEGNLEGLKEMFEQQTYYLFH
LDVNCVDSLDRTALSLATLNHHLEIIQFLLSDEIHGLKLGDALFYAIQCEFVEAIELLLE
KDPQTSLQVAPGTTSPFEPGLTPFMLAAHRNNYRILSMLYNYSHRLTFSDNELLLDEGFD
PFSWDAVMERLLHYRARASPAFMLLMFNEKGMSWDPLNAAMDLFGELHVLATREREVDES
YLHMAEQCEMFATDLLQEVRSANELADLMCYDLEDDEGSLAVVNADDANSLEPLQRQKTK
HYLKPIEKAVKYEMKDFVTSDNAQLALIYIQKGSLFRGLKGYKATLLQAFLGCIFPFLSI
AFLLAPKSAFGRLMLNPTVKFWCWLLSEIVFVLLLLSNTILMQYDVFNGLDEISPFLIAA
YFWIVGKFIQEVKEIKNQGLREYMSDIWNWNDMATILLYTAFMILRIIHFARKDDDYVRR
GSGYWHAEMWDPLPLSDICIAVSYILIHMRIMELLRAERTFGPLQVSLDLMLHDALRFSI
IFCIVFLAFGSGITELYIPYGKDKNCSCNATNLCDTDIPMVNSLPEAYWSWDPIINGTNS
TKPPCVSCKNVGDEKSLQMTGLFSGLNGMFWTLFGYGSPQEWYPINCDSNSYEIQEAIGG
IIIGLYHFGAIIVIVNMLIAMMSNSFQKTHDDSEREWKFHRTQLWLKFIRNEINRPPPMN
IIPQWKVIKAFFQSIGHFFRRLGTVCMKKRSNESMQNHNGSHLPMQNRRHQLHDDINGSL
FDGETRYAKVVRLVVLRYVKLKVLRSEMVI
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaggaacaatcaaagcccaaaagagtcccattcggtggattgaaggaggcttca
ataaaatccgcctttcaacttcctacgtttattactttgcccggatttagcgtgaaggac
tcgaaacctacttctccaacagggtttgatccgggagcaagagtgaaacgcgtgcaacct
agtcgacgcaacagtgttgcttgtgcgctgttcggaacaagaaggcgacctacagatagc
cctatcagtcgtgctattcgtcaagagcgggaatctttaaaaagaaatagtttaccgtgt
atttctacgctgtccgtattgcgtcaacatcacagcggaagtctagacttccctgatact
gaggaaaacgacactgtgtcgagtagtaacataaacttcaacctggattataacgacgtg
ggttcaagttcaaacagacccagttcaactacagctctatcaaggaagattggacgagct
cgaactaagatagaaagtgtaactagaataatgtcaaaaaagtctatcgacgacaaacag
gaaggatcgttgccagcatccttggcgaggagagtgaacataaacttgccatggatgatt
agtagtcatggttgcggtgaattgaacaagcacgagctgcagcttcttcagtattccgcc
gagggtaacttggaaggtctgaaggagatgttcgaacaacaaacctactacttatttcat
ctcgacgtaaattgcgtcgactctctcgaccgtacagctttgagcttggccactttgaat
catcatttggagatcattcagtttcttctcagtgacgagatacacggcttgaagcttgga
gatgcacttttttatgctattcaatgcgaatttgttgaagcgattgaacttttgttggaa
aaagaccctcagacatcactacaagttgctccaggaactacgtcacccttcgagcccggc
ttaacgccttttatgttggccgcacatcgcaacaactacaggattctatctatgctctac
aactactctcatcgattgacattcagtgacaacgagcttcttctggatgagggattcgat
ccattttcgtgggatgcagtgatggagagactcctgcactatcgagccagagccagccct
gcatttatgcttctcatgttcaacgaaaagggtatgtcgtgggacccgctgaacgccgcc
atggacttgtttggggaactccatgtcttggcaacgcgcgagagagaagttgacgagtcg
tatctccatatggcagaacaatgtgaaatgtttgccacggatctcttgcaggaagtccgg
tcagcaaacgagttggctgacttgatgtgttacgatctggaggacgacgagggctcttta
gcagttgttaacgctgatgacgcaaacagcctggaacctttgcaacggcagaaaacaaaa
cattatcttaaaccaatagaaaaggcggttaaatacgaaatgaaggattttgtcacttct
gacaacgctcagttggctctgatttatattcaaaagggaagtctatttcgtggtttgaaa
ggttacaaagcgacgctactccaggcgtttcttggttgtatctttccgtttctcagcatc
gctttcctgctggctcccaagagcgctttcggtcggctcatgttgaatccaactgtgaag
ttttggtgctggcttttgtcagaaatcgtgtttgttcttttgcttttgtccaacacaatc
ttaatgcaatatgacgtcttcaatggacttgatgagatatcaccgtttctgatagcagcc
tacttctggattgttggaaaatttatccaagaagtcaaagagatcaagaatcagggtttg
cgtgaatacatgtctgatatatggaactggaacgatatggccacgattctactttacacg
gcatttatgattttaagaataattcattttgcacgaaaagatgacgactatgtgagacga
ggcagcggttactggcatgcggagatgtgggaccctttacccctttcagatatatgtatc
gcggtatcctacatccttattcacatgagaatcatggagcttttacgagctgagagaaca
tttgggcccctacaggtgtcgcttgatttaatgctccacgatgccttgcgattttccatc
attttttgcatcgtcttcttagccttcgggagcggcattacggagctctacatcccttac
ggaaaggacaaaaactgttcgtgcaacgctacaaacctctgcgacaccgatattcccatg
gtcaacagtttaccagaagcttattggtcttgggatccgataattaatggtaccaatagc
accaaaccaccttgcgtgtcttgtaaaaatgtaggcgacgaaaaatccttgcaaatgact
ggactattttctggtctcaatggaatgttctggactctattcggttatggttcgcctcaa
gaatggtatccaatcaattgtgatagcaacagttatgaaattcaggaagcgattggtggt
attattatcggactttaccattttggggctatcattgttattgttaacatgcttattgcc
atgatgagtaacagtttccagaagactcatgatgattccgaaagggaatggaagtttcac
cgcacacaactctggctcaagttcatccgaaatgagatcaatagaccccctccaatgaac
attattcctcagtggaaggtgatcaaggcgttctttcaatctatcggccatttcttccgg
aggttgggcaccgtttgtatgaagaaaagaagtaacgagagtatgcaaaaccacaatgga
agtcacttaccaatgcaaaaccgtcgccatcagttgcatgacgacataaatggaagtctt
tttgacggagaaacccgatacgcgaaagtcgtacgactggttgtgctacgttacgtcaag
ctaaaagttctgcgatctgagatggttatatga
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