Clavelina lepadiformis (light-bulb sea squirt): 143470261
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Entry
143470261 CDS
T11416
Name
(RefSeq) uncharacterized protein LOC143470261
KO
K10260
F-box and WD-40 domain protein 7
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Pathway
clep04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
143470261
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clep04131
]
143470261
04121 Ubiquitin system [BR:
clep04121
]
143470261
Membrane trafficking [BR:
clep04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
143470261
Ubiquitin system [BR:
clep04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
143470261
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
EIF3I
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_SCAP
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML_2
Beta-prop_TEP1_C
DSE1_N
Beta-prop_CAF1B_HIR1
F-box-like
Beta-prop_WDR75_1st
NBCH_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR41
Beta-prop_DCAF4
ASA1
Beta-prop_SPT8
Beta-prop_WDR90_POC16_2nd
F-box
Beta-prop_RIG_2nd
CFAP251_N
Beta-prop_ACSF4
Beta-prop_Vps41
DUF4508
Beta-prop_VPS8
WD40_RFWD3
Beta-prop_NOL10_N
Beta-prop_DCAF12
Beta-prop_IFT140_1st
PAC11
Beta-prop_Aladin
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
143470261
NCBI-ProteinID:
XP_076824412
LinkDB
All DBs
Position
1:14185147..14202733
Genome browser
AA seq
679 aa
AA seq
DB search
MAFEFDGPEISSLVQPVDYNVHDFLHCIPAKKKEELKCVSVASSSDVKSSLLNINQSDVY
FHKQLDEIALWFEKWTHAQRCSVLEYLVAISGFSQFQLLHTTVQPILHRDFMYNARGRFP
DDSFMPISTESSRAIRQRLVRNRLINKYHRTKSAYVRDETDVKTYYGFLPHIKNKQSQKE
LFKDPVVVESKLRLPSLHHRRSLTDPIDHMDTTVDNPNASWLTTMQVRRHLQEEMNDVQI
SEQVYPPNAKKLYQWYSSWTGPQRATFLQLALKKLDSRQLYYLSTFLSVRSHRDVLTLLP
PRLAHRILSYLSPADLVNCAKVSHAWNELCAHNFVWKQKCSETQLDIRPIRTPRFGGWKS
AFRRDTLLKQNWKKGHCTMLHLIGHSDSVLCLTFNNKIILSGSKDCTACIWSISTGRLIH
TFVGHQKGIWAVAIITNHLVASGSYDKTVKVWGYGSSRASCLRTLYGHQGPIWCMVSQKK
FLATGSQDRTIKLWDIRHCTLLRTMKGHTSTVFCMDCDQDMTKLYTGSADRSIRVWDVEE
GLCLRVIWTGEASSIMSISFSQGLLACTSGGRVSIWDPQNGACVRSFNAHKTRIESIKLR
MDDTSARSGIVISGGQDGRLKYWKVFGLGPVIKLNEHKDQINCVCADKTRIVTASYDNTI
IVWDFREARSASRASTSYG
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atggctttcgagtttgatggtcctgaaatttcttcattagttcagccggtggactataat
gtgcatgactttcttcactgcataccagcgaagaaaaaagaggaattaaaatgtgtatca
gttgcatccagttcagatgtaaaatcatcacttttaaacataaatcaaagtgatgtctat
tttcacaaacaattggatgaaatagcactatggtttgaaaagtggacacatgcacaaaga
tgctcagttttagagtatctggttgcaattagtggttttagccagtttcagctgctacat
acaacagttcaaccaattttacacagagatttcatgtacaatgcccgaggaagatttcct
gacgattcttttatgcctatcagtactgaatccagcagagcaattcgtcaacggcttgtg
agaaatcgacttatcaataaatatcatcgaacaaaaagtgcttatgttagagatgaaact
gatgtcaaaacatattatggattcttgccacatataaaaaacaagcaaagtcaaaaggaa
ttgtttaaagatcctgttgttgtggagtcgaaactccgccttccatcattacatcacaga
agaagtttaactgatcccatagatcatatggacacaacagtagataatccaaatgctagc
tggttgactacaatgcaagttcgtcgtcatttacaggaagaaatgaatgatgttcaaata
agtgaacaagtgtatcctccaaatgcaaaaaaattgtatcagtggtatagtagctggaca
gggccacagagagcaacatttttgcaacttgcattgaaaaaattggattctcgccagttg
tattatttgtcaactttcctttctgttagatctcatcgtgatgttcttacattgttacca
cctcgtcttgctcatcgaattctctcgtatttatcacctgctgacctcgtcaactgtgct
aaggtatcacacgcctggaatgaactttgtgcacacaattttgtgtggaaacaaaagtgc
tcagaaacacagcttgatatccgcccaatccggaccccgcgatttggtggttggaaatcc
gcattcagaagggacactttattaaaacaaaactggaaaaagggacactgtactatgcta
catcttataggtcattctgacagtgttttgtgcttgacatttaacaataagatcattctg
agtgggagcaaagattgcacagcctgcatttggagcatttcaactggacgcttgattcat
acttttgttggtcaccagaaaggcatttgggctgttgccataataaccaatcatttggtg
gcaagtgggtcatatgacaaaaccgtcaaggtatggggatatggttcatcgagagctagt
tgcttacgcactctgtatggtcatcagggtccgatatggtgcatggtatctcaaaaaaaa
tttctagcaacaggatcacaagaccgaactataaaactatgggatatacgtcactgcacg
ttattgcgtacgatgaagggccatacgtctaccgttttctgcatggattgcgatcaggat
atgaccaaattatacaccggatccgcggacaggagcattcgagtttgggatgtggaagaa
ggtctctgtctccgtgtgatttggaccggggaagcgagttctatcatgtctatcagcttt
agccagggcttgctggcttgcacatcgggaggacgggtcagtatttgggacccgcagaac
ggagcttgtgtgcggtcattcaacgcgcataaaaccagaatcgaaagcatcaagctacga
atggatgacacatcagctagatccggtattgtcatatctggcggacaagacggccgcttg
aagtactggaaggtgttcggattaggtccagtcattaaactgaatgagcacaaagatcag
ataaattgcgtctgcgcggacaaaactcgcatcgttactgcttcctatgacaacaccatc
atagtatgggactttagagaagccaggagtgcctctcgggcttctacaagttatggatag
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