Caproicibacterium lactatifermentans: GJQ69_00560
Help
Entry
GJQ69_00560 CDS
T07898
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
clf
Caproicibacterium lactatifermentans
Pathway
clf00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
clf00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
GJQ69_00560 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
clf01007
]
GJQ69_00560 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
clf03016
]
GJQ69_00560 (lysS)
Enzymes [BR:
clf01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
GJQ69_00560 (lysS)
Amino acid related enzymes [BR:
clf01007
]
Aminoacyl-tRNA synthetase
Class II (A)
GJQ69_00560 (lysS)
Transfer RNA biogenesis [BR:
clf03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
GJQ69_00560 (lysS)
Prokaryotic type
Other AARSs
GJQ69_00560 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
QKN23108
UniProt:
A0A859DMP5
LinkDB
All DBs
Position
134391..135893
Genome browser
AA seq
500 aa
AA seq
DB search
MANKENQAKPAAEQDLGEQQRIRREKLAALQEAGKDPFVITTWPRDSYAADIKADFETIE
GKPVCIAGRMMSRRVMGKATFADVVDTTDRIQIYLRINEVGEEPYKEMKAYWDVGDIIGV
KGIVFRTKRGEISVRATEIKLLSKSLLPLPEKFHGLTNTDMRYRQRYLDLIMNPEVKDTF
VKRSRIITEIRSFLDNQRFLEVETPVLHTIAGGAAARPFITHHNTLNMDLYLRIALELYL
KRLIVGGFDRVYEIGRVFRNEGMDARHNPEFTMLELYQAYTDFHGMMDLTENLIRTVATK
VLGTTKVVTHGVEVDFAQPFARISMKDAVKKYAGVDFDKVQTLDEARKLADEHHLKYEQR
HKIGDIMNLFFDEYCEDKLVQPTFLTYHPTDISPLAKKSPEDPRYTERFELYIVGTEHAN
AFSELNDPIDQRQRFEAQAAAKAAGDEEACDIDEDFLTALEYGMPPTGGLGIGIDRLIMT
LTGSDAIRDVLLFPTMKPKE
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacaaggaaaatcaggccaagccggccgcagaacaggaccttggtgaacagcag
cgtattcgccgcgaaaaactagcagccctgcaggaagccggcaaagaccccttcgtcatt
accacatggccgcgtgacagctatgctgctgacattaaagcggattttgaaacgatagag
ggcaagcccgtgtgcattgccggccgaatgatgagccgccgtgtcatgggcaaagccact
tttgcggatgtagtggacacaactgaccgcattcagatttatctgcgtatcaacgaggta
ggggaagaaccctataaagagatgaaagcctactgggatgtgggtgacatcatcggcgta
aagggtattgttttccgcacaaaacgcggtgaaatcagtgtgcgtgccacagaaatcaaa
ctgctgagcaagagtcttctgccgctgccggaaaagttccatggcctgaccaacacggat
atgcgctatcgtcagcgctatctggatttgattatgaatccggaagtaaaggacacattt
gtcaagcgcagccgcattattacggagattcgcagcttcctggacaaccagcggtttctg
gaagttgaaacgccagttctgcacacgattgcaggcggtgccgcggcacgtccgttcatt
acgcatcataataccctgaatatggacctgtatctgcgcattgcgctggaactgtacctg
aagcgtctgattgtcggcggctttgaccgtgtttatgagattggccgtgtcttccgcaac
gaaggcatggacgctcgtcataatccagaattcactatgctggaactgtaccaggcctac
acggatttccatggcatgatggacctgacggaaaatttgattcgcacagtcgcaacgaag
gtactgggaacgacaaaggttgttacccatggtgtggaagtcgattttgcacagccgttt
gcacgcatcagcatgaaggacgctgtgaagaagtatgccggtgtggacttcgacaaggtg
cagacactggacgaagcacggaaactggcggatgaacatcatttgaagtacgaacagcgt
cacaagattggcgacattatgaacctgttctttgacgaatactgtgaggacaaactggtt
cagccgactttcctgacttatcacccgaccgacatttctccgctggccaaaaagagcccg
gaggacccgcgctatacggaacgctttgaactgtatattgtgggaactgagcatgccaac
gcattctctgagttgaacgacccaatcgaccagcgtcagcgctttgaggcacaggccgcg
gcaaaggcagccggtgatgaggaagcctgtgacattgatgaggacttcctgactgctttg
gagtatggtatgccaccgaccggcggtttgggcatcggcattgaccgtttgatcatgacg
ctgaccggctctgacgcaatccgtgatgtgctgctcttcccaactatgaaaccaaaggag
taa
DBGET
integrated database retrieval system
