Caproicibacterium lactatifermentans: GJQ69_02760
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Entry
GJQ69_02760 CDS
T07898
Name
(GenBank) DNA topoisomerase
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
clf
Caproicibacterium lactatifermentans
Brite
KEGG Orthology (KO) [BR:
clf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
clf03032
]
GJQ69_02760
03400 DNA repair and recombination proteins [BR:
clf03400
]
GJQ69_02760
Enzymes [BR:
clf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
GJQ69_02760
DNA replication proteins [BR:
clf03032
]
Prokaryotic type
DNA Topoisomerases
GJQ69_02760
DNA repair and recombination proteins [BR:
clf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GJQ69_02760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QKN23500
UniProt:
A0A859DP13
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Position
577481..579460
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AA seq
659 aa
AA seq
DB search
MPKKNQSYGNESISMLKGADRVRLRPAVIFGSDGIEGCEHSVFEILSNSIDEAREGYGHE
ITVTRYSDWSVQVEDHGRGCPVDYNPREKRYNWELVFCEMYAGGKYHNGEDASYEYSLGL
NGLGLCATQYAAEYMDVEIHTGETKYTLHFQHGENVGGLKKEPSTAPSGTKIHWKPDLQV
FTDIRIPVEYYEDTLRRQAIVNNGLKFVLKNQNGKKFDTQEFLYENGIADHVKEMAGDDA
LTSVQSWQAERTVRDRADKPEYHVKVNVALAFSNKTHLTEYYHNSSWLEHGGAPDKAARN
AFVYQIDSYLKQNNKYNKNESKITYADVEDCLILVISSFSNRTSYENQTKKAITNKGIQE
AMTEMLRHQLEVYFIENPLDADKIAAQVLINKRSREDAEKTRLNLKKKLTSNMDITSRVA
KFVDCRSKDVSRREIFIVEGDSALGACKQARDPDFQAIMPIRGKILNCLKADYNRIFKSD
IITDLVKVLGCGVQVKSKANKDLSSFDMDNLRWNKIILCTDADVDGFQIRTLLLTMLYRL
TPELIRQGKVFIAESPLYEIHCKNETYFAYDEVEKERFLKQLKGQKLTIQRSKGLGENEP
DMMNLTTMNPVTRRLIKVMPSDATATGKTFDLLLGDNLSGRKQYISEHGREYVEELDVS
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaaaaaaatcaaagctatggaaacgaaagcatctccatgctgaaaggcgccgac
cgggtgcgcctgcgtccagccgttatctttggttcggacggaatagaggggtgcgaacac
tccgtctttgaaattttgtcaaactccattgacgaagcgcgcgaaggctatggccatgaa
attacagtgacacgctacagtgactggtccgtacaggtggaggaccatggccgcggctgc
ccggtggactacaatccgcgggaaaaacgctacaactgggaattggttttctgcgaaatg
tacgccggcggcaaataccacaatggtgaagatgccagctatgagtacagcctgggacta
aacggccttggtttgtgtgcaacgcagtatgccgccgagtacatggacgtggaaatacac
accggcgaaaccaaatacactctgcactttcagcacggtgaaaatgtcggcggcctgaaa
aaagagcccagcactgcgcccagcggtacgaaaatccattggaaaccggacctgcaggtt
tttaccgatattcgtattccggtggaatactacgaggataccctgcgccggcaggcaatt
gtcaacaatggcctgaaattcgtcctgaaaaaccaaaatgggaaaaagtttgacacacag
gagtttctgtatgaaaatggtatcgctgaccatgtgaaagaaatggccggcgatgatgcg
ctgaccagtgtgcagtcatggcaggcggagcgaaccgtccgtgaccgtgccgataagccg
gaatatcatgttaaagtcaacgtggcactggctttttccaacaaaacgcatctaacggag
tattaccataactccagctggctggaacatggcggtgcgccggataaggctgcccgcaac
gcctttgtgtaccagattgattcctatttaaagcaaaataataaatacaataagaacgag
agcaaaattacctatgcggatgtggaggactgcctgattctggttatctcctctttcagt
aaccgcacttcctatgaaaaccagaccaaaaaagccattaccaataagggcatacaggaa
gcgatgacggaaatgcttcgtcatcagctggaagtttattttattgaaaatccgctggac
gccgataagattgccgcacaggtgctgataaataagcgcagccgagaggatgccgaaaaa
acacgcctgaacctaaagaaaaagctgaccagcaacatggatattaccagccgtgttgca
aagtttgtggactgccgcagcaaggacgtttcccgccgggaaatctttatcgtggaaggc
gattccgctttgggcgcatgcaaacaggcacgtgaccctgacttccaggcgattatgccg
attcgcggcaagattctaaactgcctgaaagcagactacaaccgtatttttaaaagcgac
atcatcacggaccttgtcaaggtgctgggctgcggggtgcaggtcaaaagcaaggccaat
aaggatcttagctcttttgatatggacaacctgcgctggaataaaattatcctctgtact
gatgccgatgtggacggctttcagatacgcaccctgctgctgaccatgctgtaccgcctg
acgccggagctgattcggcagggaaaggtgttcattgctgagtcgccgctgtatgagatt
cactgtaaaaatgaaacttactttgcctatgatgaagtagaaaaagagcgctttttaaag
cagctgaaaggccagaagctgaccattcagcgcagcaaaggattgggcgaaaacgaaccg
gacatgatgaacctgacaaccatgaaccccgtgacacgccggctgattaaagtgatgccg
tcagatgccaccgcgacaggcaagacgtttgacctgctgctgggggacaacctgtccgga
cgcaagcagtatatttcagaacatggccgcgaatatgtagaggaactggacgtcagctga
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