Caproicibacterium lactatifermentans: GJQ69_03035
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Entry
GJQ69_03035 CDS
T07898
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
clf
Caproicibacterium lactatifermentans
Pathway
clf03410
Base excision repair
clf03430
Mismatch repair
clf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
clf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GJQ69_03035 (recJ)
03430 Mismatch repair
GJQ69_03035 (recJ)
03440 Homologous recombination
GJQ69_03035 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clf03400
]
GJQ69_03035 (recJ)
DNA repair and recombination proteins [BR:
clf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
GJQ69_03035 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
GJQ69_03035 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
GJQ69_03035 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
ATPgrasp_N
Motif
Other DBs
NCBI-ProteinID:
QKN23549
UniProt:
A0A859DPT8
LinkDB
All DBs
Position
632409..634535
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AA seq
708 aa
AA seq
DB search
MNKWLQNRENARIFRAERTGELLLALKKWVVASIDRRAARQLSQQTGIPAVTAALLQSRG
CSTPQQAADQINGAPLSDPLRLKDMDRAVQRIQKAIDSFEKVTVYGDYDADGVTATAILY
SYLESSGANVSFYIPDREKEGYGLNMAAVDKLHERQVDLLITVDNGISSLPEVEHARELG
IDVVITDHHRSRPELPQAQAVVDPFRPDDTSEDKCLCGAGLAFKLVQALEGEDSDQQLLL
ETYADLLTIGTVGDVVPLTGENRTFLRTGLRLLPQTDRPGLRALLEKAGLEDRELTAENI
AFGIVPRINACGRIGSPDRAVRLLLSEDPDEACLLAADICDDNDYRKQLEAEIYESALQQ
LQQEPDRLLDRVLVVEGRGWHTGVIGIVASRLTETFGKPSIVLSCGNHEAKGSGRSVEGF
SLFQAISACADLLTKFGGHAMAAGMTMPAENTAEFRRRINAYAASQGTMPVPVLQLDGVL
KPARISLELPHAADLLQPFGTGNPKPLYGLFGVRLQEIQPVGGGKHLRLVCSAGGVRLRC
MKFGMELSAFPYHPGDMLDLAVELIGDVYNGRETLSIIVRDMKLSGCDEEALLKGRELFE
KAKRGDPLTTEEFDSLSPDRAACAGLYRTLRACGGYRGGAEGVSALGKMPFARLLVCLEL
FQEHGLVEAQAFGTQYTVTMCTVKGKVDLSDSGFLRGLRAQVQMVPQT
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgaataaatggttacagaatagagaaaatgcccggatttttcgggcagaaagaacgggt
gaacttcttttggcactcaaaaaatgggtcgttgcttccatcgaccgccgtgcggcgcgc
cagctttcccagcagactggcattccggcggtgacggcggcattactgcagtcacgtggc
tgcagtacaccgcagcaggccgcggaccagattaatggggcaccgctgagtgacccgctt
cgtttaaaagacatggaccgggctgttcagcgcattcaaaaggccattgattcctttgaa
aaagtgactgtttatggcgactatgatgccgacggtgttactgccactgccattttatat
tcctatttggagtccagcggtgcaaatgtttctttttacattccggaccgagaaaaagaa
ggctatgggctgaatatggccgcagtggacaagttgcatgagcggcaggtggacctgctc
attaccgtagacaacggcatttcttccctgccggaagtggagcacgcgcgggaactgggc
atagacgtcgtcattacggatcatcatcggtcacgtccggagctgccgcaggcacaggcc
gtagtggacccgtttcggccggacgataccagtgaagacaaatgtctgtgcggtgcggga
ctggcctttaaactggtgcaggcactggagggggaggactccgaccagcagctcctgctg
gaaacttatgcggaccttttgaccattggaaccgtgggagatgttgtgccgctgacgggt
gaaaaccggacgtttttgcggactggccttcgtttgctgccgcagacggatcgtcccggt
ctgcgtgcactgctggaaaaagcgggtttggaagaccgcgagctgacagcggaaaatatt
gcttttggcattgtgccgcgcatcaacgcgtgcggacgcatcggttcgccggaccgcgcg
gtccggctgcttttaagtgaggacccggatgaagcctgcctgctggcggcagatatttgt
gacgacaatgattaccgcaagcagctggaggcggaaatttatgaaagtgccctgcagcag
ctgcagcaggaaccggaccgtctattggaccgagtgttggttgtagaaggacgcggctgg
catacaggtgtcatcggaatcgttgccagccgcctaacggaaacatttggcaagccaagc
attgtcctttcgtgcggcaatcatgaagcaaaaggctccggacgcagtgtggagggcttt
tctctgtttcaagccatcagtgcctgcgcggacctgctgacaaaattcggcgggcacgcc
atggccgccggcatgaccatgccggcggaaaacacggcggaattccgccggcgcatcaac
gcctacgccgcatcacaggggactatgcctgtgccggtgctgcagctggacggcgtgctg
aaaccggcccgtatttccctggagctgccgcacgcggccgacctattgcagccgtttggc
actggaaacccaaagccgctgtacggtctgtttggagtgcgcctgcaggaaattcagccg
gtcggcggcggaaaacatctgcggctggtttgttcggccggcggagtacggcttcgctgt
atgaaatttggtatggaactatccgcttttccttatcacccgggggacatgttggatctt
gcagtggaactcatcggtgatgtatataacggccgagaaacgctttcgattatcgtgcgg
gacatgaaactgtccggctgtgatgaagaagcactgctgaagggacgggagctgtttgaa
aaagccaagcgcggtgacccgctgacgacagaagagtttgacagcctttcaccggaccgt
gctgcctgtgctggtctgtaccgcacactgcgtgcgtgcggcggctaccgcggtggtgcg
gagggcgtgtctgcccttggcaaaatgccatttgcccgcctgctggtttgtctggagctt
tttcaggaacatgggctggttgaggcacaggcatttggtacacaatataccgtaaccatg
tgtacggtcaaagggaaagtggatttatcagacagcggttttctgcgcggattgcgggcg
caggttcagatggtcccgcagacttga
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