Caproicibacterium lactatifermentans: GJQ69_04790
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Entry
GJQ69_04790 CDS
T07898
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
clf
Caproicibacterium lactatifermentans
Brite
KEGG Orthology (KO) [BR:
clf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
clf03036
]
GJQ69_04790 (smc)
Chromosome and associated proteins [BR:
clf03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
GJQ69_04790 (smc)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
AAA_29
DUF7491
CCDC113_CCDC96_CC
Motif
Other DBs
NCBI-ProteinID:
QKN23852
UniProt:
A0A859DSQ5
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Position
988485..992066
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AA seq
1193 aa
AA seq
DB search
MRIRSLEIQGFKTFPDKTVLQLQNGITAVVGPNGSGKSNLSDAVRWVLGEQNVRTLRCTK
MEDVIFNGTPQRKAQGYAEVTLNIDNTDRALAFDKDEVAVTRRYYRSGESEYLLNHVAMR
LKDINELFMDTGLGRDGYSIIGQGKIDAIVSAKSEDRREIFEEAAGISRCRYRKEDSERQ
LSAAEDNLVRLNDILAELKGRVDPLKEQSEKAQKFVTYSNEKKDLQIAFWLRQMDQSDKA
LHTHDDKIMLARTQQEKAEKELNALDRAAEQNFQKITGCAAQIDEVRQQSSSKEEAAAQK
DSEAAVLDSDVRHGRETVGRLETELAAASQGREHLQQEAAEKAAKITEQNQQETQLLQSE
DDVNKKLESLRAKIRASSADAEDISQQLSQLASHATESKVAEMTAASAMSEIAVRVSHAA
STISGKEELFNKLQDSRKDSSQTLADMQARIQDMRISEQQWTQQLQQHRRQTENQKQKAD
RLQIDARESIRRASLLESLEQNMEGFSRSVKVIMQASARGTISGICGPVSRLITVPPAYT
VALETALGASMQHIVVQTEQNAKDAIRMLKHRDAGRATFLPLGNLRSRVLQELSLKDCEG
FVGVASELCTSEPTYRGVRENLLGRIAVARDLDAAVEIARRFHYRFRVVTLDGQVVNTGG
SLTGGSLARNSGLLSRRSEIARTREKAQAQTAEAEKAAAAYQNCMKKDAAAEAELSALRS
GLAARQEDCIRMKANCTQLEKDISNVQKDICSLKAEQATVSQRLSDQKQKQAEARKQSSL
FAEQMAALRQKAKELTDSCSSLEQQSESCTAQLQQLRLQLLSVRKDRENLQEALQQLEIR
QQESTSQADTLQMEIREQKALIVSAQQKAATAREAAVHLHKEAAAGSSMIEQINQHRMQL
EQQDTRLRQQQRNKSDEKETIGHELTRLEERRTNLQRQYDGLAAKLWDEYELTRREAQKS
TPLLQEADMPQAQRRLNELKGLIRALGTVNVAAIEEYKEVSKRYEFLSVQIEDVEKSRDE
LRQLIRDLTHQMQEQFTLRFSQIRRNFTETFRELFGGGTASLELSNPDDILTSGIDITVQ
PPGKIVSHLESLSGGEKALVAIALYFAIMKVSPPPFCMLDEIDAALDDVNVSRFAAYLRR
MSQNTQFIVITHRRGCMEEADTLYGVTMQDEGISQVLVLHPNEIVAFNHDHEE
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatccgttccttggaaattcagggctttaagacttttccggacaaaacagtcctg
cagctgcaaaatggtattacggcggttgttggaccgaatggaagcggaaaaagcaacctc
agcgatgccgttcgctgggtgctgggggaacagaacgtccgaactctgcgctgcaccaaa
atggaggacgtcatttttaacggcacgccgcagcgaaaagcgcaggggtatgccgaagtt
acactcaacattgacaatacggaccgtgcccttgcttttgataaagatgaagttgcggtt
actcggcggtactaccgcagcggtgaaagtgagtacctgttaaaccatgtggccatgcgt
ctgaaagatatcaacgaactgtttatggacactggccttggtcgagacggctattcgatt
attggacagggaaaaatagatgcgattgtttctgccaaaagcgaggaccggcgtgaaatt
tttgaggaagcagcgggcatttcccgctgtcgttaccgtaaagaagacagcgaacgccag
ctgagcgcagcagaggataatttggtgcggctcaacgatattctggcagagctgaagggc
cgtgtggacccattaaaggaacagagcgaaaaggcacagaaatttgttacctactcaaat
gagaagaaagatttgcagatagcgttttggctgcgccagatggaccagtccgataaggcg
ctacatactcatgacgataaaattatgcttgctcgcacgcagcaggagaaagcagaaaaa
gagctgaacgcgctggatcgggcggcagagcagaactttcagaaaattaccggctgtgca
gcacagattgatgaggtccgtcaacagagcagtagcaaagaagaagcggctgcacaaaag
gacagcgaagcggcagtgctggatagtgacgtgcgccatgggagagaaaccgttggccgg
ttggagactgagcttgccgcagcgtcacagggcagggaacatctacagcaggaagcggct
gaaaaagcggcaaaaatcacggaacagaatcagcaggagacacagcttttacagtcagaa
gatgatgtaaataaaaagctggaatccctgcgtgcaaagattcgtgcaagttctgcagat
gctgaagacatttcccagcagctttctcagcttgcttcccatgcaacagaaagcaaggta
gcggaaatgactgccgcttctgccatgtctgaaattgctgtccgtgtttctcacgcggcc
agtacaatcagcggcaaagaggaacttttcaataagctgcaggactctcgaaaggacagc
agccaaacattggcggatatgcaggcacgcatacaggacatgcgtatttctgaacaacag
tggacccagcagctgcagcagcaccgccgacaaaccgaaaaccagaaacaaaaagcagac
cgtctgcagatagatgcccgtgaaagtatccgccgcgcatctttgctggaatcgctggaa
caaaatatggagggcttcagcaggagtgtaaaagttattatgcaggcctctgcccgggga
acgatttccggtatttgtggccctgtttcccggctgattacagtgccgccagcgtataca
gttgcactggaaaccgctctgggtgcttccatgcagcacattgttgtgcagacggagcag
aatgccaaagatgctatccgcatgctaaagcaccgggatgccggccgtgctaccttttta
ccgcttggtaatcttcgcagccgtgtgctgcaggaactaagtcttaaggactgcgaggga
tttgtcggtgttgccagtgaattgtgtaccagtgagccaacctaccgtggtgtaagggaa
aatctgctcggccgaattgcggtcgcacgggatttggacgctgccgtggagattgcacgc
cggtttcattaccggttccgtgtggttacactggacgggcaggttgtcaataccggcggc
tctctgactggcggcagccttgcacgcaattccggccttttaagccgccgcagtgaaatt
gcgcgcacgcgtgaaaaagcgcaggcccagacagccgaggcagaaaaggcggcggctgca
tatcaaaactgcatgaaaaaggacgccgcagcggaagcagaactttctgcgctgcgctct
ggcctagctgctcggcaagaagactgtattcgcatgaaagcaaactgtacacagcttgaa
aaagatatttccaatgtacagaaagacatatgttcactaaaggcagaacaggcaactgtt
tcacagcgtctgtcggaccaaaagcaaaaacaggctgaggccagaaaacagtcgtccctc
tttgcggaacagatggcggctttgcggcaaaaagcaaaggaattgaccgacagctgcagc
agtttggaacagcagagtgaatcctgtacggctcagttacagcagctgcggctgcagctg
ctgtccgtacgcaaagaccgtgaaaatctgcaggaagccctgcagcagttagaaatccgt
caacaggagagcacctctcaggcagacacactgcagatggaaatcagagaacaaaaagcg
ttaattgtttcggctcagcaaaaagcagccacggcacgggaagccgctgtccacctgcac
aaagaggctgctgcgggcagcagcatgatagaacagattaaccagcaccgtatgcagctg
gagcagcaggatacacgattgcgtcagcagcagcggaacaaaagcgatgaaaaagaaacc
attggccacgagcttacccgactggaagaacgccggacaaatttgcagagacagtatgac
ggccttgctgccaaattatgggatgagtatgaactgacacgccgggaggcacagaaaagt
acgccgttgctgcaggaggcggatatgccgcaggcacagcgccgtttaaatgagctgaaa
ggcctgatacgcgcgttgggaacggtcaatgtggcagctattgaagaatataaagaagtc
agcaaacggtacgaatttctttccgtacaaatcgaggacgttgaaaaaagcagggacgag
ctgcggcagctgatacgggacctaactcaccaaatgcaggagcagtttacactgcgtttt
tcacagatacggcgcaactttacagaaacatttcgggagctttttggcggtggaaccgcc
agcttggaactttctaatccagacgatattcttacttctggaattgatattacggtacaa
ccgcccggaaaaattgtttcccatttggaaagcctttccggcggagaaaaggctttggtt
gcaattgcactgtattttgccattatgaaagtttctccgccgccgttttgtatgctggac
gagattgatgcggcactggacgatgtcaatgtttcccgatttgcggcttatcttcgccgt
atgtcccaaaatacgcagttcatcgttattactcaccggcggggctgtatggaagaagcg
gataccctgtatggtgtcaccatgcaggatgaaggtatcagtcaggtgctggtgctgcat
ccaaacgaaattgtggcatttaatcatgaccatgaggagtaa
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