Caproicibacterium lactatifermentans: GJQ69_05375
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Entry
GJQ69_05375 CDS
T07898
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
clf
Caproicibacterium lactatifermentans
Brite
KEGG Orthology (KO) [BR:
clf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clf03400
]
GJQ69_05375 (radA)
DNA repair and recombination proteins [BR:
clf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
GJQ69_05375 (radA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
DnaB_C
AAA
ChlI
AAA_22
Lon_C
AAA_14
AAA_16
Rad51
nSTAND3
NTPase_1
NB-ARC
TniB
RecA
ABC_tran
DUF7125
DUF7129
AAA_19
AAA_24
AAA_23
AAA_5
PAXNEB
ATP-synt_ab
SLFN-g3_helicase
RNA_helicase
NPHP3_N
MCM
AAA_29
NACHT
GvpD_bR2
HypA
RuvB_N
DAP3
DUF7130
Motif
Other DBs
NCBI-ProteinID:
QKN23963
UniProt:
A0A859DUK5
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Position
complement(1112771..1114162)
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AA seq
463 aa
AA seq
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MAGKLKSIYRCTECGYESAKWYGKCPECGAWNTMSEALQEPAVSMRRGSIGQGIYHQTAP
QATPIREISMEEEPRYKTGVSELDRVLGGGIVKGSIILISGEPGIGKSTILTQICAYLGN
TLKILYVSGEESSRQIKLRANRLGVEPDNLYILTETDIQRVLEQVRTEKPDLLMIDSIQT
MNDTELNSAPGSVTQVRECTNAIMHIAKGMEIPAIMVGHVNKDGAIAGPKVLEHIVDAVL
YFEGDRQMSYRILRAVKNRYGSTNEIGVFDMEETGLHQVENPSASMLTGRPTNVSGTCVT
CVMEGSRPILAELQALVTSSGFGNPRRMATGFDYNRMNLLLAVLEKRAGYYFSNLDAYLN
VVGGLRLDEPACDLAVSMALVSSLKDVPIADDAVIFGEVGLTGEVRSVMHAEQRIREAER
MGFHRCILPWYNLKYLSGRQANTTIQLTGVKNVRQAFAALQQE
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggcaggaaaactaaaaagtatttatagatgtacagaatgcggatatgaatctgcaaaa
tggtatggaaaatgtccggaatgcggtgcatggaataccatgtctgaagcgctgcaggag
ccagctgtttcgatgcggcgcggtagtatagggcagggaatttatcatcaaacagcgccg
caggcgacaccaattcgagaaattagcatggaggaggagccacgctataaaacgggcgtt
tcggaactggaccgcgttctaggtggtggaattgtaaaaggttccatcatcttaattagt
ggtgaaccgggaatcggtaagtcaacgatattaacgcagatttgcgcttatttaggaaat
actctgaaaattctatatgtttctggtgaggagtccagccgacagattaagctaagggca
aaccgattgggagtggagccagacaatctttatattttgacggaaacagatatacaaaga
gttttggagcaggtccgaacggaaaaaccggatttattgatgattgactctattcaaacg
atgaatgatacagaattaaactccgctcccggcagcgttacacaggttcgtgaatgcaca
aatgcgattatgcatatcgcaaaaggaatggagattcctgcaatcatggtaggtcatgtc
aacaaagacggagccattgctgggccgaaggtcttggaacatattgttgatgcggtttta
tattttgaaggtgaccgtcagatgagctaccgcatcttgcgcgcggtaaaaaaccggtat
ggctccaccaatgaaattggtgttttcgatatggaagaaacggggctgcatcaagtagaa
aacccgtcagcatctatgctgacgggtcggccaacgaatgtttccggtacttgtgttacc
tgtgtgatggaaggcagccgtcctatattggcggagctgcaggcactggtcacttcgtcc
ggctttgggaatcccagaagaatggcaaccggctttgactataaccgcatgaatttactc
cttgcggtgctggaaaagcgggcgggctattatttttcaaatcttgatgcctatttaaat
gtagtaggcggtctgcgtttggacgaacctgcgtgtgatttggcggtatccatggcgctg
gtttccagcctgaaggatgtaccgattgccgatgatgcggtcatttttggagaagtgggc
ttaacgggagaggttcgttcagttatgcatgcagaacagcgtatcagagaagcagaacga
atgggttttcatcgatgcattcttccgtggtacaatttaaagtatcttagcggccggcag
gcaaatacaacgatacagctgaccggcgttaaaaatgtgagacaggcttttgcggcgctt
cagcaggagtag
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