Caproicibacterium lactatifermentans: GJQ69_06305
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Entry
GJQ69_06305 CDS
T07898
Name
(GenBank) aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
clf
Caproicibacterium lactatifermentans
Pathway
clf00260
Glycine, serine and threonine metabolism
clf00460
Cyanoamino acid metabolism
clf00630
Glyoxylate and dicarboxylate metabolism
clf00670
One carbon pool by folate
clf00680
Methane metabolism
clf01100
Metabolic pathways
clf01110
Biosynthesis of secondary metabolites
clf01120
Microbial metabolism in diverse environments
clf01200
Carbon metabolism
clf01230
Biosynthesis of amino acids
clf01240
Biosynthesis of cofactors
clf04981
Folate transport and metabolism
Module
clf_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
clf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
GJQ69_06305
09102 Energy metabolism
00680 Methane metabolism
GJQ69_06305
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
GJQ69_06305
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
GJQ69_06305
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
GJQ69_06305
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
GJQ69_06305
Enzymes [BR:
clf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
GJQ69_06305
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
QKN24126
UniProt:
A0A859DR10
LinkDB
All DBs
Position
complement(1296568..1297821)
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AA seq
417 aa
AA seq
DB search
MYKDLIDTIGFVKNADPEVGNAMQDELSRQRRNLELIASENIVSPAVMAAMGSVLTNKYA
EGYPGKRYYGGCQYVDVVEEIARKRACQLFGAEHANVQPHSGAQANIAVYFALLKPGDTV
MGMNLNEGGHLTHGSPVNISGTYFNFVPYGVDSKTGRIDYDKLIEQAQLVKPKMIVGGAS
AYPRIIDFKKFREAADSCGAILMIDMAHIAGLVAAGVHPNPVEYADIVTTTTHKTLRGPR
GGMILCKEKYAKAIDKAIFPGTQGGPLMHIIAGKAVCLGEAMKPSFKEYGKKIVENAQAL
AKGLLDRGVKLVSGGTDNHLLLVDLTGMDLTGKELETRLDSIRITANKNTVPGETRSPFK
TSGLRLGTPAVTTRGMQPKDMDIIASCIADTIRDFDGTKEASLAKVGALCKKYPLYE
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgtacaaggatttgatagacaccattggattcgtcaaaaatgccgaccccgaagttggc
aatgccatgcaggacgagctttcccggcagcgccgcaacctggagctgattgcctctgaa
aatatcgtttctccagcagttatggcagccatgggcagtgttcttaccaataagtacgcg
gaaggttatcccggaaagcggtactacggcggctgccagtatgttgatgtggtagaagaa
attgcccgcaagcgtgcctgccagctttttggcgctgagcatgccaatgtacagccgcat
tccggcgcacaggcaaacattgccgtttattttgcgttgctgaagcccggtgatactgtc
atgggcatgaatcttaatgaaggcggacacctaacacatggttctcctgtcaacatttcc
ggcacttattttaacttcgttccgtatggagtcgattccaaaaccggacgaattgactat
gacaagctaattgaacaggcacagctggtaaagccgaagatgattgtcggcggtgccagt
gcctatccgcgtatcattgactttaaaaaattccgggaagcggcggattcctgcggtgct
atcctgatgattgacatggcacatattgccggactggtcgccgcgggcgtgcatcccaac
ccggtagagtacgccgatattgtcaccactaccacccacaagacactgcgcggcccgcgc
ggcggcatgattctatgcaaagagaaatacgcgaaagccattgacaaggctatcttcccg
ggcacgcagggcggcccactcatgcacatcattgctggcaaggcagtttgcctgggcgag
gctatgaagccttcctttaaggaatatggcaaaaagattgttgaaaacgcacaggcactg
gccaagggccttctggaccgcggcgtcaagctggtttccggcggcacagacaaccacctt
ctgctggtggacctgaccggtatggacctgaccggcaaagagctggaaacccgcctcgat
tccatccgcattaccgcgaataagaacactgtgccgggcgaaacacgcagcccctttaag
acttccggcctgcgtttgggtacgccggccgttaccacacgcggtatgcagccgaaggac
atggatattattgcttcctgcattgcggacaccattcgtgactttgacggcaccaaggaa
gcttctttggccaaagtgggcgccctgtgcaaaaaatacccgctgtacgaataa
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