Caproicibacterium lactatifermentans: GJQ69_06375
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Entry
GJQ69_06375 CDS
T07898
Symbol
pdxS
Name
(GenBank) pyridoxal 5'-phosphate synthase lyase subunit PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
clf
Caproicibacterium lactatifermentans
Pathway
clf00750
Vitamin B6 metabolism
clf01100
Metabolic pathways
clf01240
Biosynthesis of cofactors
Module
clf_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
clf00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
GJQ69_06375 (pdxS)
Enzymes [BR:
clf01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
GJQ69_06375 (pdxS)
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Gene cluster
GFIT
Motif
Pfam:
SOR_SNZ
ThiG
NMO
Dus
TetR_C_27
IGPS
NanE
His_biosynth
DHO_dh
DUF188
Motif
Other DBs
NCBI-ProteinID:
QKN24138
UniProt:
A0A859DQJ2
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All DBs
Position
1310570..1311442
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AA seq
290 aa
AA seq
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MENRYELNKDLAQMLKGGVIMDVTSPEQAKIAEQAGACAVMALERIPADIRAAGGVSRMS
DPKMIRSIQQAVSIPVMAKVRIGHFVEAQILQAIEIDFIDESEVLSPADDVYHIDKTKFQ
VPFVCGAKDLGEALRRIAEGASMIRTKGEPGTGDVVQAVRHMRKMNSEIRRIQSMREDEL
YEAAKQLEVPYRMVRSVHDNGRLPVVNFAAGGIATPADAALMMQLGAEGVFVGSGIFKSG
NPAKRASAIVKAVTNYKDPKMLAELSTDLGEAMVGINADEIALLMAERGK
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaccggtatgagctgaacaaagaccttgcacagatgctgaagggcggcgtcatt
atggacgttacatccccggaacaggccaaaattgcggaacaggctggtgcctgtgcggtg
atggcgctggaacgcattcctgccgatattcgggccgccggcggtgtttcccgtatgagt
gaccccaaaatgattcgcagcattcagcaggctgtgtccattcctgtgatggccaaagtg
cgtattgggcactttgtagaagcccaaattttgcaggcaattgaaatagacttcatcgat
gaaagtgaagtgctctcccctgccgatgatgtctatcatatcgacaaaacaaagtttcaa
gtcccctttgtctgcggcgcaaaggacctcggtgaagcactgcggcgcattgcggaaggt
gcttccatgattcgcaccaaaggggaacccggcacgggagatgttgtacaggccgtgcgg
catatgcggaaaatgaacagtgaaattcgccgcattcaaagtatgcgggaagatgaactg
tacgaggccgccaaacagctggaggtcccctaccgtatggtacgctcggtacacgataac
ggccgtctgcctgttgtcaactttgcggccggcggcattgcaactccggcggacgccgcg
ctgatgatgcagctgggcgctgaaggcgtatttgtcggttccggcatttttaaatccggc
aaccctgccaaacgtgcttctgctatcgtaaaagctgtgacaaattacaaggaccccaaa
atgctcgctgaactttccacggacttgggtgaagcaatggtcggcattaacgcagatgaa
attgcgctgttaatggcggaacgcggcaaataa
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