Caproicibacterium lactatifermentans: GJQ69_07525
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Entry
GJQ69_07525 CDS
T07898
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
clf
Caproicibacterium lactatifermentans
Pathway
clf03030
DNA replication
clf03430
Mismatch repair
clf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
clf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GJQ69_07525 (holA)
03430 Mismatch repair
GJQ69_07525 (holA)
03440 Homologous recombination
GJQ69_07525 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
clf03032
]
GJQ69_07525 (holA)
03400 DNA repair and recombination proteins [BR:
clf03400
]
GJQ69_07525 (holA)
Enzymes [BR:
clf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GJQ69_07525 (holA)
DNA replication proteins [BR:
clf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GJQ69_07525 (holA)
DNA repair and recombination proteins [BR:
clf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GJQ69_07525 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
DNA_pol3_delt_C
Motif
Other DBs
NCBI-ProteinID:
QKN24345
UniProt:
A0A859DSB2
LinkDB
All DBs
Position
complement(1534386..1535438)
Genome browser
AA seq
350 aa
AA seq
DB search
MPECRESDLKKQIEANTLTGLYVLYGDEKYMVAYWAKRLIKKAAGKTFLDFNLQCFSGDA
AADALDDAVQALPFMASRKCVAVSDLSLDGRTPSENKKLLQLFADVPDTTVLVLSFAASD
PPFQKDKKWKKLYTECSKSGTCVACRKHSRPELEKTLVAAANRRGCVLQRVDAGKMVRYV
GDDLTALHGELEKVCAYTGSGPIAPKTIDLLVTRNLEARVYNLSRALLAGHSGQAYRILN
QLLEQNEPPVRILAVLTGAYVDLYRVRTALQSGESAMEPAKYFPEYKNRQFRLTNAERDA
HGLSTQRLRASLDILLAADLDLKGSHTAEQLILEKALARLLLAARGEKSA
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgccagaatgcagggaaagcgacctaaaaaagcagatagaagcgaacacgctaaccggg
ctgtatgtcctgtacggggacgaaaagtatatggtcgcctactgggcaaagcggctgata
aaaaaagcggcgggtaaaacgtttctggactttaatctacagtgtttttctggtgacgcc
gccgcggacgcactggacgatgcggtgcaggcgctgccgtttatggcgtcgcgcaagtgt
gtggcggtgtctgatttgtcactggacggccgcacgccgtctgaaaacaaaaagctgctg
cagctttttgcggatgtgccggacacaacggtactggttctgtcctttgcggcgagtgac
ccgccgtttcagaaggacaaaaagtggaaaaagttatatacagaatgcagtaaatccgga
acgtgcgttgcctgccggaaacacagccggccggagctggaaaaaacgctggtggcggct
gcaaaccgccgcggctgtgtgctgcagcgggtggacgcggggaagatggtgcgctatgtc
ggtgacgacctgaccgcactgcacggcgagctggaaaaagtctgtgcctacaccggcagc
ggaccgattgcacccaaaaccattgacctattggttacgcgcaatttggaggcacgtgtg
tacaatctaagtcgtgccttgctggcgggacacagcgggcaggcgtaccggattttaaat
cagctgctggagcagaacgagccgccggttcgcatcctggcggtgctgacgggtgcttat
gttgatttataccgtgtgcgtactgccttgcagagcggcgaaagcgccatggaaccagcc
aagtattttccggagtacaaaaatcgccagttccgtttgaccaatgcggagcgggacgcg
cacggtctttccacacaaaggctgcgtgccagtctggacattctgctggcggcggacctc
gacctgaaaggttcccacacggcggaacagctaattttggaaaaggcgctggcacggctg
ctgttggctgcaagaggggagaagagcgcgtga
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