Caproicibacterium lactatifermentans: GJQ69_07590
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Entry
GJQ69_07590 CDS
T07898
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
clf
Caproicibacterium lactatifermentans
Pathway
clf03420
Nucleotide excision repair
clf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
clf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GJQ69_07590
03430 Mismatch repair
GJQ69_07590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clf03400
]
GJQ69_07590
Enzymes [BR:
clf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GJQ69_07590
DNA repair and recombination proteins [BR:
clf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GJQ69_07590
MMR (mismatch excision repair)
Other MMR factors
GJQ69_07590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
AAA_12
PAH
Motif
Other DBs
NCBI-ProteinID:
QKN24356
UniProt:
A0A859DRP0
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All DBs
Position
complement(1549553..1551937)
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AA seq
794 aa
AA seq
DB search
MVSLLSEASLQLRRQVLEKEFSRINDRQREAVFTVNGPLLVLAGAGSGKTTVLVNRIANL
IRYGSAYQDTASQLSEQDIADMQEYLHHDTPLSEITRSHLAVSPVAPWHILAITFTNKAA
GELKQRLANMLGEAGSQVWASTFHSSCARILRQFGDRLDYSTHFTIYDSDDSKRLMKNCL
KELGVDEKILSCKVVLNEISRAKDTLTTPKAYQQAAGDDNRTATIARAYQMYQQHLKEAD
AMDFDDLISCTVQLLQENPDVLEHFQKKFRYIMVDEYQDTDHAQYVLIKLLAGTDGNLCV
VGDDDQSIYKFRGATIENILSFEKTFPTAKTIRLEQNYRSTQTILNAANAVISNNKERKG
KTLWTKNPVGSKIQTHTAINEQDEADYIGKQILEGVADGRKFSDYAILYRMNTQSSALEK
NFVKSGIPYRIIGGLRFYERKEIRDMIAYLSVINNASDEMRLRRIINQPKRSIGDKTLAA
ASQIADQLGESVFYVIDHANEFEPLKRTAPKLLQFAHIMRGFMDMNESGSHTLKELYDKV
LEDTNYIASLGNPANLEVQDRISNLRQLESNIQQYEEENGELASLDGFLQEVSLMTDIDN
YDDKADTVVMMTMHSAKGLEFPVVFLPGFEDGIFPGVQAIYSPEQLEEERRLAYVAITRA
REQLYILNAQSRMIFGSTNRNRPSRFLQEIPEELMEHTAARSWKQPKPGTALPVSSKEVR
EAAMESALHFGAPQSAQAHKALQFRPGDQVEHRAFGKGMVLSVTPMGNDHLLEIAFESKG
TKRIMANFAHLKRA
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atggtgagtttattgagtgaagcttcactgcagttaagacgacaggttttggaaaaagaa
ttttcccgcataaatgacaggcagcgggaggctgtttttaccgtgaatggaccgctgctg
gtgctggccggtgccggcagcggcaagaccactgtgctggtcaatcgaattgccaattta
attcgttatggcagcgcctatcaggatactgcgtctcagttgagcgaacaggacatagcg
gatatgcaggaatacctgcatcatgatacgccgctgtcggaaatcacacgcagccatttg
gcggtgtccccagtggcgccgtggcatattttggcaataacctttaccaacaaggctgcc
ggggaattgaaacagcgtctggcaaatatgctgggggaagccggcagccaggtatgggcc
agtacgttccattcttcctgtgcgcggattctccgccagtttggtgaccggctggattac
agcacccattttaccatttatgattccgatgactccaaacggctgatgaaaaactgcctg
aaggagctgggtgttgacgaaaaaatcctctcctgcaaggttgtgctgaacgagatttcc
agagcaaaggacacgctgaccacaccgaaggcttatcagcaggcagccggtgacgacaat
cgcaccgcaacgattgcccgcgcctatcagatgtaccagcagcacctgaaggaagcggac
gccatggattttgatgaccttatcagctgtacggtccagctgctgcaggagaatccggat
gttctggaacatttccagaagaagttccgctatattatggtagatgagtatcaggataca
gaccatgcgcagtacgttttgattaagctgctggccggaacagatggtaacctgtgtgtt
gtcggtgatgacgaccaaagtatttataagttccgcggggccaccattgaaaatattctc
agctttgaaaagacatttcccaccgcgaaaaccattcgtctggagcagaattaccgttcc
acacagaccattctgaacgcggccaatgccgttatttccaacaataaagaacgcaagggg
aaaaccctgtggacaaagaaccccgttggcagcaagatacagacccatacggccatcaat
gaacaggacgaggccgactatatcggcaagcagattttggaaggcgttgcggatggcaga
aagttcagcgattatgccattctgtaccgcatgaatacacagtccagcgcactggagaag
aattttgtaaaatccggtattccgtaccgcattatcggcggcctgcgcttttatgagcgc
aaggaaattcgggacatgattgcttacctgagcgttatcaacaacgccagcgacgaaatg
cgcctgcgccgtatcatcaaccagccaaagcgcagtatcggcgacaaaacgctggcggct
gcctcccaaattgcggaccagctcggtgagagtgtgttctatgtaattgaccatgcgaac
gagtttgagccgctgaagcgcaccgcacccaaactgctgcagtttgcgcacattatgcgc
ggctttatggatatgaacgaaagcggcagccatacgctgaaagaactttacgataaagtt
ttggaagataccaattacatagcaagccttggcaatcccgcgaacctggaggtacaggac
cgtatttccaacctgcgccagctggagagcaatattcagcagtacgaggaggaaaacggt
gagctggccagcttggacggcttcctgcaggaagtttcattgatgacggatatagacaac
tatgacgataaagccgatactgttgtgatgatgaccatgcactcagccaaagggctggag
tttccggtcgtgtttctgcctggctttgaggacggcatttttccaggtgtacaggctatt
tacagtccggaacagctggaagaggaacgccggctggcctatgtggcgattacccgcgca
cgcgaacagctgtatatcctcaacgcacagagccgcatgattttcggttccacaaatcgg
aaccgccccagccgcttcttacaggaaatcccagaggagctgatggagcacacagcggcc
cgcagctggaagcagcccaaaccgggcacggcgcttccggtgtcctccaaagaggtgcgg
gaggcggccatggagtcggcactgcactttggcgcgccgcagtcagcacaggcacacaag
gccctgcagttccgccccggcgaccaggtggagcacagggcatttggcaagggcatggtt
ctgtccgtcaccccgatgggcaacgaccacctgctggagattgcctttgaaagcaaaggc
accaaaagaattatggcaaacttcgcccacctgaagcgcgcataa
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