Caproicibacterium lactatifermentans: GJQ69_08990
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Entry
GJQ69_08990 CDS
T07898
Symbol
lsa
Name
(GenBank) Lsa family ABC-F type ribosomal protection protein
KO
K19350
lincosamide and streptogramin A transport system ATP-binding/permease protein
Organism
clf
Caproicibacterium lactatifermentans
Pathway
clf02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
clf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
GJQ69_08990 (lsa)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clf02000
]
GJQ69_08990 (lsa)
01504 Antimicrobial resistance genes [BR:
clf01504
]
GJQ69_08990 (lsa)
Transporters [BR:
clf02000
]
ABC transporters, eukaryotic type
Other subfamilies
Macrolide exporter
GJQ69_08990 (lsa)
Antimicrobial resistance genes [BR:
clf01504
]
Gene variants
Macrolide resistance genes
Transporters
GJQ69_08990 (lsa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_29
AAA_22
Dynamin_N
ABC_tran_Xtn
AAA_15
YobI-ATPase
Motif
Other DBs
NCBI-ProteinID:
QKN24594
UniProt:
A0A859DSE3
LinkDB
All DBs
Position
1856257..1857735
Genome browser
AA seq
492 aa
AA seq
DB search
MSLINIVNLTFSYEGSFDNIFENVSFQIDTNWKLGFTGRNGRGKTTFLKLLMGKYEYSGT
ISSSVSFEYFPYDVPTPDSFVIDVIHEISPNAQDWEIMRELSLLKVSDDILYRQYTTLSK
GEQTKVLLAALFLKENSFLLIDEPTNHLDTMGRKILSDYLKRKHGFILVSHDRVFLDNCI
DHILAINKTNIEIQKGNFSSWWSNKEMQDSFEMAENEKRKKDIDRLTAAAQRTSGWSDRV
EKSKNGPTNSGSKLDKGFVSHKAAKMMKRSKSIETRQQTLISEKSKLLKNIEINEALKIS
PLRYYTNCLLELSDISVMYGDNVVCSSISFTVEQGDRIALQGKNGSGKSSILKLICGEGI
SYRGTIRKSGRLKISYVPQSTSDLSGPLSEYIKHNLLDESLFKAILRKFDFPRGQFKKKL
DEFSEGQKKKVLLAKSLCDQAHLYIWDEPLNYIDVLSRMQIEKLLLEYRPTILFVEHDSA
FCENVATKTIQL
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgtctttaatcaatatagtaaatttaactttttcttatgaaggaagttttgacaacatt
tttgaaaatgtcagtttccagattgatacaaattggaagctaggctttacaggtcgaaac
ggccggggtaaaaccacctttttaaagcttcttatgggaaaatacgaatacagcggcacc
atttccagcagtgtctcctttgagtatttcccctatgatgtacccacaccggactccttt
gtcatcgatgtcattcatgagatcagtccaaatgcacaggactgggagattatgcgcgaa
ttatctctgctgaaggtgtcggatgatatattgtatcggcagtatactacgctttcaaaa
ggtgagcagacaaaagtccttcttgccgctttgtttctcaaagagaacagttttttgctg
atagatgaacctaccaatcaccttgacaccatgggaagaaaaattttgagcgattatctg
aaaagaaagcacggatttattctggtttcacatgaccgggttttcctcgacaattgtatt
gatcatattctcgctataaacaaaaccaatatcgagatacaaaaaggaaatttctcctca
tggtggagtaacaaagagatgcaggacagctttgaaatggctgaaaatgagaaacgaaaa
aaagatatagaccgattaacggccgctgctcaaaggacttccggctggtctgaccgagtc
gagaaaagcaagaacggcccaaccaattcgggcagcaagctcgacaaaggctttgtgtct
cataaagcagctaagatgatgaagcgttcaaagagtatcgagacacgtcagcaaaccttg
atcagtgaaaaatcaaaattgcttaaaaacattgaaatcaatgaagctttaaaaatttct
cctcttcgatattataccaattgtttgctggaactttcggacatttcggttatgtatggc
gataatgtcgtctgttcgagcatcagttttactgtggaacagggtgaccgaatcgcattg
cagggaaaaaacggatccgggaaatccagcattttgaagctgatttgcggagaaggcatc
tcttatcggggaaccattagaaaaagcggaaggctaaaaatttcctatgttccccaaagc
acctcagatttaagcggacccttgagcgaatatatcaagcacaatcttcttgatgaaagc
ctttttaaagccatcctgcggaaatttgatttcccacgtggacagtttaaaaagaaactt
gacgagtttagtgaaggccaaaaaaagaaagtgctgctcgcaaaaagcctttgtgaccaa
gcgcacctgtatatctgggatgaaccgttaaactacattgatgtcctttccagaatgcaa
attgaaaaactgttgctcgaatacaggcccacgattctgttcgttgaacacgacagcgct
ttctgtgaaaatgttgcaacaaaaactattcaattatag
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