Chlorobium limicola: Clim_1766
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Entry
Clim_1766 CDS
T00766
Name
(GenBank) Radical SAM domain protein
KO
K10026
7-carboxy-7-deazaguanine synthase [EC:
4.3.99.3
]
Organism
cli
Chlorobium limicola
Pathway
cli00790
Folate biosynthesis
cli01100
Metabolic pathways
Module
cli_M00988
PreQ1 biosynthesis, GTP => 7-Aminomethyl-7-deazaguanine
Brite
KEGG Orthology (KO) [BR:
cli00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00790 Folate biosynthesis
Clim_1766
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cli03016
]
Clim_1766
Enzymes [BR:
cli01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.99 Other carbon-nitrogen lyases
4.3.99.3 7-carboxy-7-deazaguanine synthase
Clim_1766
Transfer RNA biogenesis [BR:
cli03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
Clim_1766
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
Fer4_12
RIM2a_ZnF
Motif
Other DBs
NCBI-ProteinID:
ACD90805
UniProt:
B3EEJ5
LinkDB
All DBs
Position
1941598..1942260
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AA seq
220 aa
AA seq
DB search
MTISISEIFHSIQGESSFAGWPCAFVRLAGCGHGCRYCDTTYAEKPGTEMETDEIFEKID
EIGAQLVEITGGEPLLQKEVYPLMERLCDRKEKVLLETGGFLSVAKVDQRVHKIIDLKAP
SSGVCNKNNPQNIELAMRSGKAEISSFEFKIVVADREDYLWARTMLTDTGLAEACTVMLG
VVFGKLEPERLAQWILEDRIRVRMQLQLHKYIWPPEMRGV
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgacgatctccatctctgaaatcttccactccatccagggagagtcgtcattcgccgga
tggccctgcgccttcgtccggcttgccggatgcggccacggctgccggtattgcgacaca
acctatgctgaaaaacccggcacagagatggagaccgacgaaatcttcgaaaaaatcgac
gaaatcggagcgcagctggtggaaataaccggaggagaaccgctgctgcagaaagaggtc
tatccgctcatggaaagactctgcgaccggaaagaaaaagtgctgctcgaaaccggagga
ttcctttccgtagcaaaggtggatcagcgcgtgcacaaaattatcgacctgaaagcgcca
tcttccggcgtgtgcaacaagaacaatccgcaaaacatcgagctggccatgcgaagcgga
aaggcagaaatcagctcgttcgaattcaaaattgtggtcgccgatcgcgaggactacctc
tgggcaagaacgatgcttacagataccggtcttgccgaagcctgcacggtcatgttgggg
gtggtgttcggtaaactggaacccgaacgcctggcgcagtggattctcgaagaccggatc
agggttcgcatgcagctccagttgcataagtatatttggccaccggaaatgagaggggta
taa
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