Corynebacterium liangguodongii: C3E79_04630 Help Entry C3E79_04630       CDS       T07317                                  Name (GenBank) DNA ligase (NAD(+)) LigA   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism clia  Corynebacterium liangguodongii Pathway clia03030   DNA replication clia03410   Base excision repair clia03420   Nucleotide excision repair clia03430   Mismatch repair Brite KEGG Orthology (KO) [BR:clia00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     C3E79_04630    03410 Base excision repair     C3E79_04630    03420 Nucleotide excision repair     C3E79_04630    03430 Mismatch repair     C3E79_04630  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:clia03032]     C3E79_04630    03400 DNA repair and recombination proteins [BR:clia03400]     C3E79_04630 Enzymes [BR:clia01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      C3E79_04630 DNA replication proteins [BR:clia03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      C3E79_04630 DNA repair and recombination proteins [BR:clia03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      C3E79_04630    NER (nucleotide excision repair)     GGR (global genome repair) factors      C3E79_04630    MMR (mismatch excision repair)     DNA ligase      C3E79_04630   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       C3E79_04630 SSDB OrthologParalogGFIT Motif Pfam:  DNA_ligase_aden OB_DNA_ligase HHH_2 Nlig-Ia BRCT DNA_ligase_ZBD PTCB-BRCT HHH_5 PGRL1_N BRCT_2 Motif Other DBs NCBI-ProteinID:  AWB85050 UniProt:  A0A2S0WH07 LinkDB All DBs Position 965776..967791 Genome browser AA seq 671 aa AA seqDB search MSDISADLQRQWDDLASEVRHHRDLYYNGQPVISDAEFDALYKQLEAFEEAHPELAVPDS PTKEVGAPVASGFNDVEHLERMASLDNVFSAEELTEWLAKTPGPYLTELKIDGLSIDLVY EGGELVRAATRGDGRVGEDITANARVIEDIPHRLTGDFPPLLEVRGEVFIRPEDFPELNE QRIKEGGKPFANPRNTAAGGLRQKNPEDVKKRRLHMICHGIGAREGFSPATQHEAYEKLA EWGLPVSEYTRLAGTPEEVHEAVRYWADHRHDAIHEMDGLVVKVDSVAAQRGLGMTSRAP RWAIAYKYPPEEVTTKLLGIEVSVGRTGRATPFAVLEPVFVSGSTVSMATLHNQHEVKRK GVLIGDTVVVRKAGEIIPEVLGPVADLRDGTEREFVYPTNCPACGTVLAPAKEGDADWRC PNTRSCPAQLAERLTYLAGRGAFDIEALGEKGAADLLASGVLDDEGGLFDLTEDDLEKSS VYTTKAGKVNASGKKLLANLATAREKELWRVLVALSIRHVGPTAARALAARYKSMEALID APVADLADTDGVGTIIAESFKDWFEVDWHRGIVEKWAAAGVRMEDSTEDAPPQTLEGLTV VVTGTLEGFTRDEAKEAILARGGKAAGSVSKKTSYVVVGENAGSKADKARELGVPILDEA QFRQLLETGQN NT seq 2016 nt NT seq  +upstreamnt  +downstreamnt gtgagcgacatttccgcagacctgcagcgccaatgggacgacctcgccagcgaggtgcgc caccaccgcgacctgtactacaacggccagccggtgatctccgacgccgagtttgacgcg ttgtacaagcagctcgaggccttcgaggaggcccacccggagctcgcggtgcctgattcg ccgacgaaggaggtcggcgccccggtggccagcggtttcaacgacgtcgagcacttggag cgcatggccagcctggataacgtgttttccgccgaggagctcaccgagtggctggcgaag acgccggggccctacctcacggagctcaagatcgacgggctctccatcgacctggtctac gagggcggcgagctggtgcgagccgcgacgcgcggggacggccgcgtcggtgaggacatc accgccaacgcgcgggtcatcgaggacatcccgcaccggctgaccggggatttcccgccg cttctcgaggtgcgcggcgaggtgttcatccggcccgaggacttcccggagctcaacgag cagcgcatcaaagagggcgggaagcccttcgccaacccgcgcaacaccgccgccgggggc ctgcggcagaagaaccctgaggacgtgaagaaacgcaggctgcacatgatctgccacggc atcggcgcgcgtgagggcttctcgcccgcgacccagcacgaggcctacgagaagctcgcg gagtgggggctaccggtctccgaatacacgcgcctggccgggacgcccgaggaggtccac gaggccgtgcgctactgggcggatcaccgccacgacgcgatccacgagatggacggtctg gtggtcaaggtcgacagcgtggccgcccagcgtggtctcgggatgacctcgcgcgccccg cgctgggcgatcgcgtacaagtacccgcccgaggaggtgaccacgaagcttctcggcatc gaggtctccgtgggccgcaccgggcgggccaccccgtttgccgtgctcgagccggtgttc gtctccggctccacggtgtcgatggcgacgctgcacaaccagcacgaggtcaagcgcaag ggcgtgctcatcggcgataccgtggtggtgcgcaaggccggcgagatcatcccggaagtc ctcggcccggtggctgacctgcgcgacggcaccgagcgcgagttcgtctacccgacgaac tgcccggcctgcggcacggtgttggcgccggcgaaggagggcgatgccgactggcgctgc ccgaacacgcgctcgtgcccggcgcagctcgccgagcgcctgacctacctcgccgggcgc ggcgccttcgacatcgaggcgctcggcgagaagggcgcggccgacctgctcgcgtccggc gttttggacgatgagggcggcctgttcgacctcaccgaggacgacctggagaaatccagc gtgtacacgacgaaggccggcaaggtcaacgcctcgggcaagaagctgttggccaacctc gccaccgcgcgcgagaaggaactgtggcgcgtgctcgtcgcgctgtccatccgccacgtc gggccgaccgcggcccgcgcgctcgccgcccgctacaagtccatggaggcgcttatcgac gcccccgtggccgacctcgcagacaccgacggagtcggcacgattatcgccgagagcttc aaggactggttcgaggtcgattggcaccgcgggatcgtcgagaaatgggccgcggcgggg gtacgcatggaagactcgaccgaagatgccccgccgcagaccctcgaggggctcaccgtg gtggtgaccggcacgctggaggggttcacccgcgacgaggcgaaggaggcgatcctcgcg cgcggcggcaaggcggccgggtctgtgtcgaaaaagacgagctacgtcgtggtgggggaa aacgccggctccaaggcggacaaggcgcgcgagctgggcgttcctattcttgacgaggcg cagtttcggcagctgctggagacggggcagaactaa

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