Chondrinema litorale: OQ292_00560
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Entry
OQ292_00560 CDS
T09098
Name
(GenBank) ABC transporter permease
KO
K02004
putative ABC transport system permease protein
Organism
clit
Chondrinema litorale
Brite
KEGG Orthology (KO) [BR:
clit00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clit02000
]
OQ292_00560
Transporters [BR:
clit02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Putative ABC transporter
OQ292_00560
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MacB_PCD
FtsX
ABC2_membrane_3
Sigma_reg_N
Motif
Other DBs
NCBI-ProteinID:
UZR94307
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Position
complement(116117..118663)
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AA seq
848 aa
AA seq
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MFKNILKVAFRSLIRQKFYSLINITGLAVGLASCLFILIYISSELNFDKHNRSYEQIYRL
NQTNIWSEENVRLTSGGPPVAALLKENYPEVEGSARVYQPGSYFITFEQPGQQSMAFEEK
RLAGVDTSFISMFNFEWLAGSPQNALDEQNSVVITRSTANRYFGEVTNFNELVVGKMLKI
DNGKTAQNVVVKGVIEDMPFASHFHFDFMFSIYTFKEMKRMEWSWIWSQCVTYVKLKEGT
DVAALENKMADLPKKYAGNTIERVLEISYEEFEKKGKPWELFLLPLKDIHLRSEGITNPY
PLDPVGSIDNLYVFGLAAIFIILLACINFMNLATARAAGRAREIGVRKTLGSNRESLIWQ
FLLESMIISAFAALLSLGICELLRPYFNELTDNTFHKPISEYSEITYFLPIATIITGLLA
GIYPAFYLTRFQPVEVLKGRLPGSKGGEKRFRSFLVSMQFAVSTFMVISTALVLSQVKFM
SNKDLGYNKENLFSIRHIEMLGGHSSSESETYNADKLNRQKALKEEVSKIPGVKIASQSN
GMMPHIYYHDYFKSNATGKKFSLNHIITDVDFLNLIDVELLYGRNFNHEKGSDLNKVILN
EAAVEQLGYTKGNYEKALGEFISYPYPSAPTFEVIGIMKDAKLEGGYNESQIGPIAVFLQ
SENINDYTKESFLTVKVEKNTDLHDLIGNIEQAWAKQSGGLPFQYFFVDDRFDALFKTEV
KLGKVLGVFTFIAVLIAVLGLLGLVSYISEKKTKEIGIRKVLGASPIEILLLLSKEFTFL
LIAGFLIAAPLSYYFISSWLANYADRVSISPLVFILALVGGLLLAWITISLQALKAIHLK
AVDAIRTE
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgtttaagaatattttaaaagtagcctttagaagtttaatcagacagaagttttatagc
ctaattaatattacaggtttggctgtaggtttagcatcttgtctgtttatcttaatttat
atttcgtctgaacttaactttgataaacataatagaagttatgaacaaatttatcgctta
aaccaaacaaacatttggtcagaagaaaatgtaaggttaacatcaggagggccaccagta
gcagctttattaaaagagaattatcctgaggtggaggggagtgctagagtgtatcagccg
ggaagttattttataacatttgagcagcccggccaacagtctatggcttttgaagaaaaa
cgattggctggtgtagatacttcttttatctccatgttcaattttgaatggttggctggt
tctcctcaaaatgcactagatgagcaaaactcagtagtaatcacaagaagcacggctaat
agatattttggcgaggttacaaactttaacgagttagtagtggggaagatgctcaaaata
gacaatggaaaaacagcgcaaaatgtagtggttaaaggtgtgattgaagatatgcctttt
gcttctcactttcacttcgactttatgttttctatctacacttttaaggagatgaaaaga
atggagtggagctggatttggagccaatgtgtcacttatgtaaaactgaaagaaggaaca
gatgtagctgcactagaaaataaaatggcagatttgcctaaaaaatacgcaggtaacacc
atcgaaagagtcttggagattagttacgaagagtttgagaaaaagggaaaaccttgggag
ctgtttttattaccactaaaagatattcatttaagatcagaaggaattaccaatccatat
ccacttgacccagtaggcagcatagataacttatatgtgtttggtttagctgcaattttt
attattctactagcttgtatcaattttatgaacttggcaacagcaagagcagcaggaaga
gctagagaaattggtgtaagaaaaacattaggctctaatagagaatcattaatctggcag
ttcttgctcgaatcgatgataattagtgcatttgcagcgcttttatcattaggaatatgc
gaattattaaggccatattttaatgaattaacagataacactttccataaacccatatct
gaatactcagaaatcacctactttttaccaatagcaaccattattacaggtttgttggca
ggtatttatccagcattttatttaactcgcttccaaccagttgaagttttaaaaggacga
ttgccaggttcaaaaggtggcgaaaaacgtttcagaagctttttggtaagtatgcagttt
gctgtttcaacattcatggttatttcaacggctttggtactttctcaagtaaaatttatg
agtaacaaagaccttggttacaataaagaaaatctattcagtattaggcatatcgaaatg
ctcggagggcattctagctcagaaagcgaaacttacaatgccgataaattaaacagacaa
aaagcattaaaagaagaagtatcgaaaatacctggggtaaaaattgccagccaaagcaat
ggtatgatgcctcatatatattaccatgattactttaaatcgaatgctactggtaaaaaa
tttagcttaaaccatattattactgatgtcgatttcttaaatcttatcgatgtagaactg
ctatacggaagaaattttaatcacgaaaaaggttctgatttaaataaggtaattctcaat
gaagcagcagtagagcaattaggttatactaaaggtaattacgaaaaggctttaggtgaa
tttatctcgtatccttatccatcggcaccaacctttgaggtaataggcattatgaaagat
gcaaagctagaaggtggctacaatgaaagtcaaataggcccgatagcagtgttcttacaa
agtgaaaatattaatgattatacaaaggagtcttttcttacagtaaaagttgaaaaaaac
acagatctgcatgatttgattggcaacatcgaacaggcttgggctaaacaatctggtggt
ttgccttttcaatacttctttgtagacgatcgctttgatgcactttttaaaaccgaagta
aagctaggcaaagtattaggtgtatttacctttatcgctgtgcttatcgcagttttaggt
ctgcttggtttggtgtcttacatctcagaaaagaaaacgaaagagataggaataagaaaa
gttctgggagcatcgcctatagaaatcttattactgctctctaaagaatttaccttctta
ctaatcgcaggtttcttaatcgcagctccactaagttattacttcatttctagttggtta
gctaattatgcagatagagtgagtatttctccactcgtatttattctggctttagtagga
ggtttattacttgcttggattaccatatcgctacaagctttaaaagccattcatttaaaa
gccgtagacgcaattagaaccgaatag
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