Chondrinema litorale: OQ292_00980
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Entry
OQ292_00980 CDS
T09098
Name
(GenBank) bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/3-hydroxyacyl-ACP dehydratase
KO
K16363
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:
3.5.1.108
4.2.1.59
]
Organism
clit
Chondrinema litorale
Pathway
clit00061
Fatty acid biosynthesis
clit00540
Lipopolysaccharide biosynthesis
clit01100
Metabolic pathways
clit01212
Fatty acid metabolism
Module
clit_M00083
Fatty acid biosynthesis, elongation
Brite
KEGG Orthology (KO) [BR:
clit00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
OQ292_00980
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
OQ292_00980
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
clit01005
]
OQ292_00980
01004 Lipid biosynthesis proteins [BR:
clit01004
]
OQ292_00980
Enzymes [BR:
clit01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
OQ292_00980
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.59 3-hydroxyacyl-[acyl-carrier-protein] dehydratase
OQ292_00980
Lipopolysaccharide biosynthesis proteins [BR:
clit01005
]
Lipid A
OQ292_00980
Lipid biosynthesis proteins [BR:
clit01004
]
Fatty acid synthase
Component type
OQ292_00980
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
FabA
ApeI-like
MaoC_dehydratas
Motif
Other DBs
NCBI-ProteinID:
UZR94390
LinkDB
All DBs
Position
complement(219317..220714)
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AA seq
465 aa
AA seq
DB search
MHTKQHTIKKQVTVSGVGLHTGVPANMTFKPAKPNHGIKFKRIDLEGEPVVDADVDNVVD
LSRGTTIEQSGARVNTVEHTLAALVGLQIDNVLIEIDGPEPPIMDGSSIKFVESLKEAGL
EEQGVMRNFFEIPESVFYKEEDRQVELAALPLNDYRVTVMVDYNSPVLGSQHASLNHISQ
FPEEIASSRTFCFLHELEMLRKNNLIKGGNFNNAIVVVDKVVSEEELSELATLFNLPKVE
VKAEGILNNIELRYNNEPARHKLLDLIGDLALAGRPIKGQILAARPGHAANVAFAKKIKK
MMQKNTKTDAVPEYDPKMPAVLDINQIGQVLPHAYPFRLVDKIFQLDENAVTGIKNVTIN
EPFFQGHFPGNPVMPGVLQIEAMAQTGGILLLNTVDNPEEYWTYFVGIDNCRFKKMVVPG
DTLILKCELLAPVRRGIAKMKGQGYVAGKLVCEASMSACLVKKDI
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgcatacgaaacaacatacaattaagaagcaagtaacagtttcaggtgtgggactgcat
accggtgtgccggctaatatgacatttaagccagctaaacctaaccacggtattaaattt
aagagaattgaccttgaaggagaacctgtagttgatgctgatgttgataatgtagttgac
ctttctcgaggtactactatagaacaaagtggagcgagagttaatactgtagaacatact
ttagctgctttagtaggtttgcaaattgataatgtgctgatagaaatagatggacctgaa
cctccaattatggatggtagctcaatcaaatttgtagagtctttaaaagaagcaggtttg
gaagaacaaggggtgatgagaaacttctttgaaattccagaaagtgttttctataaagaa
gaagacagacaagttgagttagcggcgcttccattaaacgattacagagtaacagtaatg
gtagattacaattctcctgtattaggtagccaacatgcttctttaaatcatataagccag
tttccagaagaaattgcttcgtctagaacattctgttttcttcacgaactagaaatgctt
cgtaaaaacaacctaattaaaggtggtaactttaacaatgctattgtagtggttgacaaa
gttgtaagtgaggaggagctttcagaattagcaactttatttaacttacctaaagtagaa
gtaaaagcagaaggtattttaaataatattgagctgagatataataatgagccagctaga
cataaactattagatttaataggtgatttagcattagctggtagaccaataaagggtcag
atattggcagcacgtccaggacatgcagcaaacgttgcttttgcaaagaaaattaagaaa
atgatgcaaaagaatacgaaaacagatgctgttcctgaatacgatcctaaaatgcctgct
gttttggacatcaaccaaataggacaggtattacctcatgcataccctttcagattagtt
gataagatttttcaacttgatgaaaatgctgttacaggtataaaaaatgtaacaattaac
gaacctttctttcaaggtcactttccaggaaaccctgtaatgccaggtgttttacagatt
gaagctatggctcaaactggtggaatccttctattaaatactgttgataatccagaagaa
tattggacttattttgtaggtattgataattgtagatttaaaaaaatggtagtaccaggc
gacacgctaatattaaaatgcgagttgttagcaccagtaagaagaggtattgccaaaatg
aaggggcaaggttatgttgccggaaaattagtttgtgaagccagcatgtcagcatgtttg
gttaaaaaagatatttaa
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