Chondrinema litorale: OQ292_02355
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Entry
OQ292_02355 CDS
T09098
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
clit
Chondrinema litorale
Brite
KEGG Orthology (KO) [BR:
clit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
clit03016
]
OQ292_02355 (truB)
Enzymes [BR:
clit01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
OQ292_02355 (truB)
Transfer RNA biogenesis [BR:
clit03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
OQ292_02355 (truB)
Prokaryotic type
OQ292_02355 (truB)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
UZR94659
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All DBs
Position
complement(572153..572845)
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AA seq
230 aa
AA seq
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MTEDKLYNQAFDFAAGEVLLIDKPYEWTSFDVVKKIRNAIKIKKVGHAGTLDPLATGLLI
VCTGKKTKTINQIQDQEKVYTGKMVLGKTTPSFDLETEIQDVADVDDLTDEQIHNACGNF
IGEIDQIPPLFSAIKVQGKRAYTHARNNEKVELKSRKIHIYSFEIKEINLPEVSFYVKCS
KGTYIRSLTRDFGELLGKGAYLSELRRTHIGDYKVEDAYQLDDFIKYLKK
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
ttgactgaagataagttatataatcaagcttttgattttgcagctggagaggtcttgtta
attgacaaaccgtatgaatggacatcttttgatgttgtaaaaaaaatcagaaatgccatt
aaaataaagaaggttggccatgcgggtacgcttgatccactggcaactggtttattaatt
gtttgtactggtaagaaaactaagactatcaatcaaattcaagatcaggaaaaagtttat
acgggtaaaatggttttaggtaaaactacaccttcatttgacctagaaactgaaattcaa
gatgtagccgatgttgatgatcttacagacgagcaaattcataatgcttgtggaaatttc
attggtgaaatagatcaaattcctccacttttttctgcgataaaggttcagggaaaaaga
gcatatactcatgctcgaaataacgaaaaggttgaactaaaatctagaaaaatacatata
tatagttttgagattaaagagataaatttgccagaagtatctttttatgtaaaatgctca
aaaggaacatatataagaagtctgactagagattttggtgaattactaggaaaaggtgca
tatctctctgaacttagaagaactcatattggtgattataaagttgaagatgcttaccag
ctagatgattttatcaagtatctgaagaaatag
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