Chondrinema litorale: OQ292_02425
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Entry
OQ292_02425 CDS
T09098
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
clit
Chondrinema litorale
Pathway
clit03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
clit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
OQ292_02425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clit03400
]
OQ292_02425
Enzymes [BR:
clit01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
OQ292_02425
DNA repair and recombination proteins [BR:
clit03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
OQ292_02425
Prokaryotic type
OQ292_02425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
PTHB1_CtH
Motif
Other DBs
NCBI-ProteinID:
UZR94672
LinkDB
All DBs
Position
complement(587231..587893)
Genome browser
AA seq
220 aa
AA seq
DB search
MTVKIAPLWYEQLKDEFEKDYFKKLTEFIKDDIQNHTVYPPGKLIFNAFEKCSFDDAKVV
IIGQDPYHGEGQANGLCFSVNDGIRFPPSLKNIFKEINSDLGKSIPESGNLERWASQGVL
LLNATLTVRKKEAGSHQKKGWEEFTDAVITKVSEKKENVVFILWGAYAQKKGSIIDKEKH
YVLESAHPSPFSADRGFFGNKHFSKTNEYLKKIGKEPIDW
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgactgttaaaattgcgcctttatggtatgaacaactcaaagatgagtttgaaaaagac
tattttaaaaagttaacagagtttatcaaagatgatattcagaaccacaccgtataccct
ccaggcaaactaatttttaatgcttttgaaaaatgtagcttcgatgatgccaaagtggta
ataatcgggcaagacccttatcatggggaaggccaggctaatggtttatgtttttctgtt
aatgatggaataagatttcctccctcgttaaagaatatatttaaagaaattaatagcgat
ttgggtaaatctatacccgaaagtggaaacttagaaaggtgggcttcacaaggagtttta
ttactcaacgcaacattaacagtaaggaaaaaagaagctggttcacatcaaaaaaagggt
tgggaagagtttaccgatgctgtaattaccaaagtttcagaaaagaaagaaaatgtagtt
tttatactttggggagcatatgcgcaaaagaaaggaagcataatagataaagaaaaacac
tatgtattagaatcagcacatccatcgcctttttcagcagatcgaggtttttttggcaat
aaacacttcagtaaaaccaatgaatatttgaaaaaaataggaaaagagcctatagattgg
tga
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