Chondrinema litorale: OQ292_03960
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Entry
OQ292_03960 CDS
T09098
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
clit
Chondrinema litorale
Brite
KEGG Orthology (KO) [BR:
clit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clit03400
]
OQ292_03960
Enzymes [BR:
clit01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
OQ292_03960
DNA repair and recombination proteins [BR:
clit03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
OQ292_03960
Prokaryotic type
OQ292_03960
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
PfUIS3
DUF5634
Motif
Other DBs
NCBI-ProteinID:
UZR94968
LinkDB
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Position
961841..963154
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AA seq
437 aa
AA seq
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MKISIFWHRRDIRLADNAGLYHALKSDYPVLPIFIFDTNILDDLEDKQDKRLVFIHDYLQ
KLDEKLQENKSALLVKYGTPKEVWEDLLKDFDIAEVYTNRDYEPYAKERDEEIGKLLSKK
DIPFKTFKDQCIFEKDEVVKNDGGLYTVFTPYSKKWHEKLKLKKSDFYVRSYPTEKYFNN
FYQTKPFKIPSLKDIGFEDIETEFPDRSIESKTLNAYADKRDYPAIKGTSRLSVHLRFGT
VSIRHLAQRGLRHSDTWLNELIWRDFYMMILDHFPHVVKQNFNKKYDALKWRNNEKEFEA
WCKGKTGYPIVDAGMRELNETGFMHNRVRMITASFLTKHLLIDWKWGEAYFAQKLLDYDL
SANNGGWQWAAGTGTDAQPYFRIFNPYSQTDKFDKDKKYIKKWVTEFGTDKYPEPIVDHK
EARERTLDSYKKALGKD
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatttccattttctggcatagaagagatataagattagcagataatgccggactt
taccatgcactcaaatcagattatcctgttttaccaatattcatttttgatacaaacata
ttggatgacttagaggataagcaagataaaaggcttgtgtttatacacgattaccttcaa
aaattagatgagaaactacaagaaaataaatctgctttattggtaaagtatggaacacct
aaagaagtatgggaagacttgctcaaagattttgacattgcggaagtatacaccaacaga
gactacgaaccttacgcaaaagaaagagatgaggagataggcaaactattaagtaaaaaa
gacatcccctttaaaacatttaaagaccaatgtatttttgaaaaagatgaagttgtaaaa
aatgatggcggcctttacactgtatttactccttatagcaaaaagtggcatgaaaaactc
aaactaaaaaagagtgatttttatgtacgttcctaccctacagaaaagtatttcaataat
ttctatcaaaccaaaccttttaaaattccatcattaaaagacattggttttgaagatata
gaaactgaatttccggataggtcgattgaaagcaaaacgcttaatgcttatgccgacaaa
agagattacccagcaataaaaggcacaagtaggctaagtgtacacttgcgatttggcact
gtaagtattagacacttagcccagcgaggtttaagacatagcgatacttggctaaacgag
ctcatatggagagatttttatatgatgattctagaccatttcccccatgtggttaagcaa
aactttaacaaaaaatacgatgctttaaagtggcgaaataacgaaaaagaatttgaggct
tggtgtaaaggtaaaaccggttacccaatagtcgatgcaggcatgcgagaactcaacgaa
actggctttatgcataacagagtaagaatgattacagcgagttttttaacaaagcattta
cttatagactggaaatggggcgaggcttactttgctcaaaagttattagactacgattta
tctgccaataatggcggttggcaatgggcagcaggaactggcaccgatgcccaaccttat
tttagaatttttaacccctactcccaaacagataagtttgacaaggataaaaagtacata
aagaaatgggttactgagtttggaacagataaatatccagaaccgattgtagaccataaa
gaggctagagaaagaacattagatagctacaaaaaagcattgggaaaagactaa
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