Chondrinema litorale: OQ292_06480
Help
Entry
OQ292_06480 CDS
T09098
Symbol
pbpC
Name
(GenBank) penicillin-binding protein 1C
KO
K05367
penicillin-binding protein 1C [EC:
2.4.99.28
]
Organism
clit
Chondrinema litorale
Pathway
clit00550
Peptidoglycan biosynthesis
clit01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
clit00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
OQ292_06480 (pbpC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
clit01003
]
OQ292_06480 (pbpC)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
clit01011
]
OQ292_06480 (pbpC)
Enzymes [BR:
clit01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
OQ292_06480 (pbpC)
Glycosyltransferases [BR:
clit01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
OQ292_06480 (pbpC)
Peptidoglycan biosynthesis and degradation proteins [BR:
clit01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
OQ292_06480 (pbpC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
BiPBP_C
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
UZR95458
LinkDB
All DBs
Position
complement(1525278..1527656)
Genome browser
AA seq
792 aa
AA seq
DB search
MIRFVRKYPYHFSVVILILSIAYYFCLPSPLFETPYTTVLKDRNNELLGAIIADDGQWRF
PKADSVPEKFKKAITTFEDSWFYYHPGFNPVSLVRATIQNLNAGRVVSGGSTLSMQTIRL
ARMGKSRTFLEKFIEIILATRLEFSNSKDEILALYSAQAPFGGNVVGLETASWRYFGRKA
DELSWGETALLAVLPNQPSLLFPGKNEDRLLKKRNRLIDKLFDEGYLDSLTCELAKSEPL
PAAPLPQPSLASHLLTRQINEGKKGKAIKTTLSKSLQKNVNTIIDKHHQYLKANEVYNLA
AMVIEVESGEVLAYVGNTNVKEKGDFGDAVDVITAPRSTGSIMKPFLYAAMLNEGFILPK
TLLPDIPTYISGFAPQNFNRRFEGAVHADIALAKSLNIPAVRMLADFSVEKFYYKLKELG
VSTLTKNPGHYGLSLILGGAEATLWDLAGVYAGMARTLNRFDQLTPYHYQKNTYYSPKLN
FTDHTVNAISDKGTEQHAELSAASIWFSFEAMLKVYRPGADANWELYETSKKIAWKTGTS
YGHRDAWSIGVTPGYVVAVWVGNADGEGRPGLTGLTAAAPVLFDIFGLLPDKGWFNQPHD
EMIEAEVCRKSGYLATENCTEKDSVLIQETGIRTSPCPYEVLVHLDKTEKFQVSTACESV
SNMTHKSYFVLPPVQEWYYRFRHSDYKPLPPYRPDCLSDNFTDNKIMQMIYPVGTAKVFI
PRELDGKLGNAIFEVAHRKPSTKIYWHLDEEYLGETVQFHEMALHPSSGKHTLTLVDENG
EVLEQSFEVADR
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgattcggtttgtgcgtaagtatccttatcactttagtgtagtgatattaattttatca
atagcttattatttctgtcttccatcaccattgtttgaaaccccctatactacagtactt
aaagatagaaacaatgaattgctaggagctattatagctgatgacggacagtggcgattc
cctaaagccgattcagttcctgaaaagtttaaaaaagcgattacaacttttgaagattct
tggttttactatcatcctgggtttaatcctgtttctttagtacgagctaccattcaaaat
ctaaatgctggaagggttgtaagtgggggtagtacattaagtatgcaaacaatcaggctg
gctcgaatgggtaaatcaagaacttttctggaaaaatttatagaaattattctggcaaca
aggcttgagttttccaattctaaagatgagatacttgctttatattctgctcaagcgcca
tttggtggcaatgtagtgggtttagaaacagcctcttggagatattttggaagaaaagca
gatgagttatcgtggggagaaacggctttgttggcagttttacctaaccaaccttcttta
ctttttcccggaaagaatgaagacagattgctgaaaaaacgcaatcgtctaatagataaa
ctctttgatgaaggctatttggatagtcttacttgtgagttggctaagtctgaaccttta
cctgctgctccattgccacaaccttctcttgcttcgcatttactaacaaggcaaattaat
gaaggaaaaaaaggaaaggcaattaagacaacgctttctaaaagtttacagaaaaatgta
aatactattatcgataagcatcatcaatatttaaaagccaatgaagtatacaatctggct
gcaatggtgatagaggtagaaagtggcgaggtgctcgcttatgtgggaaataccaatgta
aaggagaagggagattttggagatgcagtagatgttataacagctccaagaagtacaggt
agtataatgaagccatttttgtatgcagctatgttgaatgaaggctttattttgcctaaa
acattattgccagatatacctacatatatcagtggttttgcgccacaaaattttaatagg
cgattcgaaggggcagttcatgcagatattgcgctagctaaatctctgaatattccagca
gtgcgtatgttggcagattttagtgtagaaaaattctattataaattgaaagagttaggt
gtttcaacacttacaaaaaatccgggacattatggtttgtcattaatcttaggaggagca
gaagctacattatgggatttagcaggtgtatacgcaggtatggcaagaactttaaatcgt
tttgatcaactcacaccttatcattatcaaaaaaatacttattactctccaaaactaaat
tttacagatcataccgttaatgcaatttctgataaaggtacagagcaacatgctgaatta
agtgctgcgtctatttggttctcttttgaagcaatgttgaaagtttacagaccaggagct
gatgccaattgggaattatatgaaacatcaaagaaaattgcttggaaaacaggtacaagt
tatgggcatcgtgatgcttggtctattggagttactcccggatatgttgttgctgtttgg
gttggtaatgcggatggagaaggtagaccgggcttaactggtttgactgctgctgctcca
gttttgtttgatatttttggcttactgccagataaaggttggtttaatcaacctcatgac
gaaatgattgaagctgaagtttgcagaaaaagtggttatttagctacagagaattgtacg
gaaaaggatagtgtgttgattcaggaaactggtattagaacctcgccatgcccatatgag
gttttagtacatcttgataaaactgaaaagtttcaggtgagtactgcttgcgagagtgtg
agtaatatgacacataaaagctattttgtattgcctccagtgcaagaatggtactatcga
ttccgccattcagattataaacctttacctccatacagacctgattgtctttctgataac
tttactgataataaaattatgcagatgatttatccagttggcactgcgaaagtttttatt
ccaagagaactggatggaaaactaggtaatgcaatttttgaagttgctcatagaaaacca
tctaccaaaatatattggcatttggatgaagagtatcttggtgagacagttcagtttcac
gaaatggctttgcacccttcatcaggaaagcatacacttaccttagtggatgaaaatggc
gaggtactagaacaaagttttgaagtagctgatagataa
DBGET
integrated database retrieval system
