Chondrinema litorale: OQ292_07035
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Entry
OQ292_07035 CDS
T09098
Name
(GenBank) integration host factor subunit beta
KO
K03530
DNA-binding protein HU-beta
Organism
clit
Chondrinema litorale
Brite
KEGG Orthology (KO) [BR:
clit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
clit03032
]
OQ292_07035
03036 Chromosome and associated proteins [BR:
clit03036
]
OQ292_07035
03400 DNA repair and recombination proteins [BR:
clit03400
]
OQ292_07035
DNA replication proteins [BR:
clit03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
OQ292_07035
Chromosome and associated proteins [BR:
clit03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
OQ292_07035
DNA repair and recombination proteins [BR:
clit03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
OQ292_07035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_euk_2
RACo_C_ter
DUF2267
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
UZR95567
LinkDB
All DBs
Position
complement(1664855..1665157)
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AA seq
100 aa
AA seq
DB search
MTKAEVIAEIANQTGMDKGDVTAAIEAFFKVVKNKMADGDNIYVRGFGSFVNKRRAAKIG
RNISRNTAMEIKEHYVPSFKPSKTFVEKIKKSDKVKLANQ
NT seq
303 nt
NT seq
+upstream
nt +downstream
nt
gtgacaaaagcggaagtgatagctgaaattgcaaatcaaactggaatggataagggagat
gtgacagcggctatagaagcattttttaaggttgttaaaaacaaaatggccgatggagat
aatatctacgttagaggatttggtagttttgtgaacaaacggagagctgccaaaattggt
cgtaatatctcgagaaatacagctatggagatcaaagagcactatgtgcctagttttaaa
ccttcaaagacttttgtcgagaaaattaagaagagcgataaagtgaagttggcaaaccaa
taa
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