Chondrinema litorale: OQ292_07115
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Entry
OQ292_07115 CDS
T09098
Symbol
rsgA
Name
(GenBank) ribosome small subunit-dependent GTPase A
KO
K06949
ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.-
3.1.3.100
]
Organism
clit
Chondrinema litorale
Pathway
clit00730
Thiamine metabolism
clit01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
clit00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
OQ292_07115 (rsgA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
clit03009
]
OQ292_07115 (rsgA)
Enzymes [BR:
clit01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.100 thiamine phosphate phosphatase
OQ292_07115 (rsgA)
Ribosome biogenesis [BR:
clit03009
]
Prokaryotic type
GTPases
OQ292_07115 (rsgA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RsgA_GTPase
RsgA_N
MMR_HSR1
FeoB_N
GTP_EFTU
Septin
AAA_16
AAA_22
AAA_29
ATP-synt_ab
MobB
ABC_tran
cobW
nSTAND3
NTPase_1
AIG1
Peptidase_U32_C
Ras
Roc
RNA_helicase
SRPRB
AAA_24
NACHT
AAA_25
WRKY
AAA_7
AAA_19
AAA_33
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
UZR95582
LinkDB
All DBs
Position
complement(1682333..1683295)
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AA seq
320 aa
AA seq
DB search
MAGKNKNPKNVAYQQGTIIRSTGSWYEILAEDDKIYKGRLRGKFKIKGIKATNPIAVGDN
VSFFSEDTEESTVVINSIEDRDNYIIRQSTHKKGHIHIIASNLDQAVLIATISMPRTSLG
FIDRFLVSCESFHVPACIIFNKADLLSEEEENYLAYLTNLYSNLDYKVLSASALYDDTLS
DITAYLKGKTSLIAGHSGVGKSTLINRLVPNALQRTAEVSNFAKKGVHTTTYAEMFKMDE
ASYLIDTPGIKEFGILGLEEYEVSYFFPEIREESENCKYYNCTHTHEPGCAVVDAVNEEK
IEVSRYRSYLSILENEDNRR
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtaagaataaaaacccaaagaatgtagcataccagcaaggaacaatcattcga
tcaacaggttcttggtatgaaatacttgccgaagatgataaaatttacaaagggcgatta
agagggaagtttaagattaaaggtataaaagcgactaatccgattgctgttggcgacaat
gtttctttttttagtgaagatactgaagaaagtactgtagttattaacagtattgaagat
agagataattacattattaggcagtctacccataagaaagggcatattcatattatagcc
tcaaacctagatcaggcagttttaattgctaccattagtatgcccagaacctctctagga
tttatagatcgttttttggtttcttgtgagtctttccatgtgcctgcatgtatcatattt
aacaaagcagatttactaagcgaagaggaagaaaattatcttgcttacttaactaattta
tatagcaacttagattataaagtgttgtctgcttctgcattatatgatgatacactttca
gatattacagcttacctaaaaggtaaaacaagtttgattgcaggtcactctggtgttggt
aagtcaacgttaattaataggttggttcccaatgcactgcaaagaactgctgaggtatca
aactttgcaaaaaaaggcgtacacaccactacctatgcagagatgtttaagatggatgaa
gcgtcttatttaatcgatactccgggaattaaagaatttggtatactcggcttagaagag
tacgaagtgtcttacttctttccagaaatacgcgaagaatcagagaattgcaagtattat
aactgtactcacacacatgagcctggttgcgcagtagttgatgcggtgaatgaagaaaaa
attgaagtatctagatacagaagctacctcagcatcctcgaaaatgaagataacaggagg
taa
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