Chondrinema litorale: OQ292_08620
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Entry
OQ292_08620 CDS
T09098
Name
(GenBank) hypothetical protein
Organism
clit
Chondrinema litorale
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
nSTAND1
WD40_Prp19
WD40_WDHD1_1st
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR90_POC16_2nd
EIF3I
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_SPT8
NBCH_WD40
PROPPIN
nSTAND3
Ge1_WD40
AAA_16
Beta-prop_RIG_1st
Beta-prop_DCAF4
RsgA_GTPase
Beta-prop_VPS8
AAA_29
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
UZR95875
LinkDB
All DBs
Position
2075932..2079039
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AA seq
1035 aa
AA seq
DB search
MIAEEVQTITNPFPGLRPFRTDEAHLFFGREGQVDEVLDKLEENKFVAVLGASGSGKSSL
MYCGLIPGLYGGFMTQAGSNWRVVVTRPGIAPIHNLNKAILKSSEYWNENSSDDKDIKTA
SGMATLRSSSLGLVDFVKQQQNEPDEHFLILVDQFEELFRFSKIARDEDSINESYAFVKL
ILEAVKQSEVPIYIVMTMRSDYIGDCAHYPHLTQLINDSHYLIPKMTRLQKKAAIMGPAA
VAGTVMSSRLLQQLLNDLGDKQDDLPILQHALMRTWELWRKNKDSEEIDIFHYESIGTLK
EALSLHADEAYEDLDDRQKYICEVLFKSLTEKGQDGRGVRRPTKVKEISGIADCDTDEVI
HVVEVFRKVGRTLLMPPPSVPLTAESVVDISHESLMRVWNRCREWVDEEAESAKVYKRLS
EAAEMYQVGQASLWRPPDLQLALNWQMKQKPNLTWAERHHPAFERTMVFLEMSRKAYETE
QKSKEKHQKAIIRRNKIAALIGAFVAIAGLILVLYANLKKQEAESEKERALLSEGKAESA
AEEARKNAERAELQKHLAMEKEAEALKNEQEAKFAQEMAQLSAEEAEKQKIIAIAKAEEA
RKQSQIAREQTQIARRKTRLAELSELKAETAAEKAERLRYISIAQKMAIKSIQIKDTTQR
ALVAKQAFIFNQRYDGNLYNPDIYDGLYYAQKLMNGESFNVISDHDDAVRSLTTDRTSKW
LFSSGSDGKIFMRSFDSLSGTPINQIVEENTIFRKIAVSPNNEIMACGTDESKIILYDRN
TLNVLNELHGHDGTVWEILFDKSGKYMFTTGSDMKIIKWDTDTWTYEVITELNTIIRALA
LSRNDKSLVAALKNGTILEWNLEDFTDLRVLHSELSDAATSLKFSPDGSLLVKGFESGRI
FLWDIEQDNMINYLEGHDARITELSFSKNGKFMASSSWDGTIRLWKMDQINEQPIVMRDQ
NSWVQAICFSPDDRYLIAACMDHSIKIYPIDIEEMASGICDNIKRNMSDDEWKKHVANEI
DYELTCQDLPKGRDD
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atgattgcagaagaagtacaaacaattactaacccttttcctggacttcgcccgtttaga
acggatgaggctcacctgttttttggcagggaagggcaagtagatgaggtacttgacaaa
ctagaagaaaacaaatttgtagctgttcttggtgcttcgggtagcggtaaatcttcttta
atgtattgtggtttaattcccggcttatatggcggatttatgacacaagcaggttctaat
tggcgagtggtagttaccagacctggtattgccccgattcataacctaaataaagcaatt
cttaaaagttcagagtactggaacgaaaacagttctgatgataaagacatcaaaactgca
tctggtatggctacacttagaagcagctctcttggactcgtagactttgtaaaacaacaa
caaaacgaaccagatgaacacttcctaattctagttgatcaatttgaagaactattcaga
tttagcaaaattgcaagagacgaagactctataaacgaatcatatgcctttgtaaagctc
attcttgaagctgttaaacagagcgaagttcctatatatatcgtaatgacgatgcgctca
gattacattggtgattgtgcgcattatccacatcttactcaactaattaacgatagtcat
tacctaattcctaaaatgacacgtctccagaaaaaagcagctattatgggacctgctgct
gttgctggaactgttatgtcgtcaagacttttacaacaattattaaatgaccttggcgac
aaacaagatgaccttcccattcttcagcatgcattaatgcgtacttgggaattatggaga
aaaaataaagacagtgaagagattgatatttttcactacgagtctattgggacacttaaa
gaggccctgtctcttcatgcagatgaagcttacgaagatctagatgacagacaaaaatat
atttgtgaagttctttttaaatcgcttacagagaaaggtcaagacgggagaggagtaaga
aggccgacaaaagttaaagaaatttctggtattgcagattgtgatacagatgaagtaatt
catgttgttgaagtttttagaaaagttggcagaactttactcatgcctcctccttctgtt
ccattaactgcagagtctgtggttgatatctcacatgaaagtttaatgagggtatggaac
agatgtagagaatgggtagatgaagaagctgaatcagccaaagtttataaaagactttcc
gaagcagcagaaatgtatcaggtggggcaggctagtttgtggagaccaccagacttacaa
ttagcactcaactggcagatgaagcaaaagcctaatttaacttgggcagaaagacatcat
cctgcatttgaaagaactatggtttttcttgaaatgagtagaaaagcctatgaaactgaa
caaaaaagtaaagaaaagcatcaaaaagcgattataagaagaaacaaaatcgccgcatta
ataggtgcttttgtcgcaattgcaggattaattctggtattatacgccaacttaaaaaaa
caagaggcggaatcggagaaggaaagagcactcctttctgaaggaaaagcagaatcggct
gcagaagaagcaagaaaaaatgctgaaagagcagaattacagaaacatctcgcaatggag
aaagaagctgaagcattaaaaaatgagcaggaagcaaagtttgctcaggaaatggctcaa
ctaagtgctgaggaagctgaaaaacaaaaaattattgcgattgcgaaagctgaagaagcg
cgtaaacaatctcaaattgcaagagaacaaacacaaattgcccgaagaaaaacgaggctt
gcagaattaagtgagctaaaagccgaaactgcagcagaaaaagctgaaaggcttagatat
atctctatcgctcaaaaaatggcgattaaatcaatacaaattaaagatacaacgcaaaga
gctttagtggccaaacaagcatttatttttaatcaaagatatgatggaaacctctataac
cctgatatctatgatggcttgtattatgcacaaaagctaatgaatggtgaaagctttaat
gtaattagtgaccacgatgatgcagttcgatctcttacgacagatagaacaagtaaatgg
cttttctcatctggtagtgatggaaaaatctttatgcgctcattcgatagtctttctgga
acacccatcaatcaaattgtagaagaaaacactattttcagaaagatagctgtatcacct
aacaatgagataatggcttgtggtacagatgagtctaaaatcattttatatgatcgaaat
acattaaatgtgcttaatgagcttcacgggcatgatggaacagtgtgggaaattttattt
gacaaatctggcaaatatatgttcactaccgggtctgacatgaaaattattaaatgggat
acagatacatggacctatgaagtaatcaccgagctgaatacaatcattagagctttggca
ttgagcagaaatgataaatctctagttgctgccctaaaaaatgggactattctagaatgg
aaccttgaagactttacagacttaagagttttgcattctgaactatctgatgcagctact
tcattaaagttttctcccgatggctctcttttagtaaaggggtttgaaagcggaagaatt
tttctgtgggatatagagcaagataatatgatcaattatctagaagggcatgatgctaga
attacggaactatcattcagtaaaaatggaaagtttatggcttcatctagttgggatgga
actataagactatggaaaatggatcagataaatgaacaacctattgtgatgagagatcaa
aattcatgggtacaagctatctgtttcagccctgatgaccgttatctcatagctgcatgt
atggatcattctataaaaatttatcctattgatatagaagaaatggcttcaggtatttgc
gataatattaagagaaatatgtctgatgatgaatggaaaaaacatgtagcaaacgaaatt
gattacgaactaacttgccaggatttaccaaaaggcagagatgattag
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