Chondrinema litorale: OQ292_10795
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Entry
OQ292_10795 CDS
T09098
Name
(GenBank) DEAD/DEAH box helicase
Organism
clit
Chondrinema litorale
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
ERCC3_RAD25_C
NOP19
Motif
Other DBs
NCBI-ProteinID:
UZR92348
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All DBs
Position
2606579..2609500
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AA seq
973 aa
AA seq
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MNVSPQKPFQLVYSLFEHQYLGYLFESFVVEVNESGKLTLRNQNISSLNAHEFATGLEES
DYEIIKIMDSMQQEAIIKKFYNKKVLPARFFDTVYEIKKDEALQAKIQVYLEKKRNQVLN
LLPGKEVYEMANDGDPTYRKLVVEEEKASVRFHFFRNEDNTHYYPTIRHKEGKVEFKYRN
AIILCDTPAWLMVDGHIYSFEKGVDGKKLRPFLRKNFISIPKSMEDDYYKKFVAPLIESF
DVFAKGGINIVTEKYQFVPELNIAEYSESASSSLFGESENGNGKYEEKILLSLNFKYGNY
KFSSADRKPITVVMEKNNNDEYIFHRTKRYLSGEKNIIDKLQEMGLPLNNGKSLLNKSIA
FDIISERSQELKDAGIVLNQKKSEKKYFVGKSSISVDISEGRDWFDINAKVHFGEYEIPF
LTIRKLIIRNKREFTLPNGEIAVIPESWFTRYADLFHFVHENDKQPALHKHHIALVQELK
TGNLAKVTMSRKLNRLKDFNKIDEFEVGSEFQGVLRPYQQAGYNWLNFLSEYNFGGCLAD
DMGLGKTVQTLALLQKLKQNEQSSATLLVMPTSLLYNWEMEAKKFTPDLKVFSYTGTNRN
KDVTNFDNYDLVITSYGIIRIDIEILQEYYFNYVILDESQVIKNPSSIISKSVNNLKSRR
RLILTGTPIENTTLDLWSQMNFANPGLLGTEKYFKQEYQLPIERKKDGSKMMKLHALIKP
FILRRHKSQVAKDLPEKTEKIHYVSMTADQEKEYEETKSQFRNKILEEIETHGMGKSQIV
LLQGLTLLRQIANHPQMVNPDSTSTSGKLEDLMYMLETALKENHKILIFSQFVKHLTIVR
NELDKQDIRYAYLDGTTKDRQGEVTNFQTDDDLKVFLISLKAGGLGLNLTAADYVFILDP
WWNPAIEQQAIDRAHRIGQENKVFTYKFIAKNTVEEKILALQQEKLKLATDLITTEESFI
KKLTKEDIESLLE
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtatcaccacaaaaaccttttcaacttgtatattcactgtttgagcatcagtat
ttaggatatctgttcgaatcatttgttgttgaggtaaacgaaagtggtaaattaacactt
agaaatcagaacatatctagtctaaatgctcacgagtttgcaactggtctggaagagtcc
gattatgagataatcaagataatggactctatgcagcaagaggcaatcatcaaaaagttt
tataacaaaaaagtattacctgcccggtttttcgatacagtttacgaaataaaaaaagac
gaagctttacaggcaaaaattcaggtttatcttgaaaagaagagaaatcaggttttaaat
ctgttacctggaaaagaagtttatgaaatggcaaacgatggggatccaacctatcgaaag
ctagttgtggaggaggaaaaagccagtgttaggttccatttttttagaaatgaggataat
actcactattatccgactatcagacacaaagaaggcaaggttgagtttaaatatagaaat
gccattattctttgcgatacacctgcatggttaatggtagatggccacatatattcattt
gaaaagggagtagatggcaaaaaacttagaccatttcttagaaagaattttatttccatt
cctaaaagtatggaagacgactactacaagaaatttgtagcaccattaattgagtcgttt
gatgtatttgccaagggaggaataaacatagtaactgaaaaatatcaatttgtaccagaa
ttgaatattgctgaatattcagaatctgcatcaagttcattgtttggagaaagtgagaat
ggcaatggaaaatacgaagagaagatactgctttctttaaattttaaatacggcaactac
aagttttcttcggcagaccgcaagccaattacagttgtgatggaaaaaaataacaacgat
gaatacattttccatcgaacgaaaaggtacctaagcggtgaaaaaaatattattgacaaa
ttacaagaaatgggtttgcctttgaataatggtaaatctttacttaataaatctattgct
tttgatataataagtgaaagatctcaagagcttaaagatgcaggtattgtattaaatcag
aagaaatctgagaagaagtattttgttggtaaaagcagcataagtgtagatataagtgaa
ggaagagactggtttgatattaatgccaaagtacattttggcgaatacgaaatacctttt
cttacaattaggaagctaattataagaaataaaagagagtttactttaccaaatggtgaa
attgcggtaattccagaaagctggtttacgcgctatgcagacctttttcattttgtacac
gaaaatgataaacagcctgctttacataaacatcatattgctttagttcaagagctaaaa
actggcaacttggctaaagtaaccatgagccgtaagctaaataggttaaaagactttaat
aaaatcgatgagtttgaagtaggatcagagtttcaaggtgtgcttcgaccttatcaacaa
gcgggttataactggctaaatttcttgtcggaatataacttcggtggttgcttggcagac
gatatgggtctgggtaaaaccgtgcaaacactggctttactacagaagcttaagcaaaat
gagcaaagtagtgcaacactgcttgtaatgccaacatctcttttatacaactgggagatg
gaagcaaaaaagtttactcccgacctcaaagtattttcttacactggaaccaatagaaat
aaagatgtaaccaatttcgataattacgatttggtaattacatcttatggaattattaga
attgatattgaaattctgcaagaatattatttcaactatgttatcctggatgagtctcag
gtaattaaaaatccttcttctattatttctaaatctgtaaataatttaaaatctcgaaga
agattaattcttacaggtacgccaatagaaaataccacgcttgatttatggtcgcagatg
aattttgctaatccgggtttattaggtacagaaaaatattttaagcaggaatatcaatta
ccgatagaaaggaaaaaggatggcagtaagatgatgaaactgcatgctttaattaaacct
tttattttaagaagacataaatctcaagttgctaaagatttacctgagaaaactgaaaag
atacattatgtatcgatgacggcagatcaggagaaagaatacgaagagacgaaatctcag
ttcaggaataaaattttagaagagattgaaactcacggaatgggtaaatctcagattgtg
ctactacaaggtttaaccttactgagacagattgctaatcatccacaaatggtgaatcca
gactctacgagcacctctggaaagcttgaggatttaatgtatatgttagaaactgcatta
aaggaaaatcacaaaattttgatttttagccagtttgttaagcatttgactatagtgaga
aatgagctagataaacaagacattagatatgcttatttagatggtactaccaaagacaga
caaggcgaggttacaaacttccagacggatgatgatttaaaagtatttcttatctcatta
aaagctggtggtttaggtttgaatttaactgccgcagattatgtgtttattctagaccct
tggtggaacccggcaattgaacaacaggcaatagatagagcgcatagaattggtcaagaa
aacaaggtatttacctataagtttattgctaaaaatactgtagaagaaaaaattctggcg
ttacagcaagaaaaacttaagctcgctacagatttaattacaactgaagaaagctttata
aagaagcttaccaaggaagatatagaatctttacttgaataa
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