Chondrinema litorale: OQ292_10855
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Entry
OQ292_10855 CDS
T09098
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
clit
Chondrinema litorale
Pathway
clit00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
clit00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
OQ292_10855 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
clit01007
]
OQ292_10855 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
clit03016
]
OQ292_10855 (aspS)
03029 Mitochondrial biogenesis [BR:
clit03029
]
OQ292_10855 (aspS)
Enzymes [BR:
clit01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
OQ292_10855 (aspS)
Amino acid related enzymes [BR:
clit01007
]
Aminoacyl-tRNA synthetase
Class II (A)
OQ292_10855 (aspS)
Transfer RNA biogenesis [BR:
clit03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
OQ292_10855 (aspS)
Prokaryotic type
Other AARSs
OQ292_10855 (aspS)
Mitochondrial biogenesis [BR:
clit03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
OQ292_10855 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
UZR92359
LinkDB
All DBs
Position
2622317..2624071
Genome browser
AA seq
584 aa
AA seq
DB search
MLRTNTCGELRISDVGKKVKLNGWVQRVRDKGALVWIDLRDRYGITQIFGEEGVTDKELL
NQMKELGREFVISVEGEVAERFSKNDKIPTGDIELKIEKLEVLNESKVPPFKIENETDGG
EDLRMKYRYLDLRRDVVRSSLQIRHRMAKSVRDYLDHQEFIEVETPVLIKSTPEGARDFL
VPSRMNPGEFYALPQSPQTFKQILMVAGFDRYFQLVKCFRDEDLRADRQPEFTQIDCEMS
FVEREDILQTFEGLAKYLFKEVKGIEVEDFPRMEYADAMSLYGSDKPDIRFEMTFKDLNE
VAKGKGFKVFDDSEAVLGICVKGCAEYTRKQLDEITNWVKRPQIGAKGLVYVKCNADGSY
KSSVDKFFNQDDLKAWAEVSGAEANDLLLVLSGDLKKTRKALGELRLEMGSRLGLRDKNV
FKPLWVVNFPLLEWDEESERFHAMHHPFTSPIPEDLKKLETEPGEVRANAYDMVINGVEI
GGGSIRIHNRDVQSRMFDALGFTKEEAQAQFGFLLEAFEYGAPPHGGIAFGFDRLCSLFG
GSDSIRDFIAFPKNTSGRDVMIDSPSPASLEQLKELGIKLFEEK
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgctgagaacaaatacatgtggtgagctgagaatttccgatgtaggaaaaaaggttaaa
ttaaacggttgggtacagcgagttagagataaaggcgcgctggtttggatagacttaaga
gaccgttatggtataactcagatattcggtgaagaaggagttaccgataaggagttgctt
aaccagatgaaagagcttgggagagaatttgtaataagtgtagaaggagaagttgcagaa
cgattctcaaaaaatgataaaattcctactggagatatcgaattgaaaatagagaaacta
gaagtgctaaacgaatctaaagttcctccatttaaaatagaaaacgaaactgatggtgga
gaagacctcagaatgaaatatcgctacctagatcttagaagagatgttgtaagaagcagt
ttgcaaataagacacagaatggcgaaatctgtgagagattatttagatcatcaggaattt
atcgaggtagaaactcctgtgttgataaaatctacaccagaaggtgctagagactttctt
gttccttctagaatgaatccaggtgagttttatgctttgccgcaatctccccaaacattt
aagcaaattttgatggtagctggtttcgaccgttattttcaattggttaaatgttttaga
gacgaagatttaagagcagaccgccaaccagagtttactcaaatagactgcgaaatgtct
tttgttgaaagagaagatattttacaaacatttgaaggcttagctaaatacttattcaag
gaagttaaaggtattgaggttgaggatttcccaagaatggaatatgctgatgcgatgagc
ctttatggttctgataaaccagatattcgttttgaaatgacttttaaagaccttaatgaa
gtagcaaaaggtaaaggctttaaagtctttgatgattctgaagctgttttggggatatgt
gtaaaaggttgtgcagaatatacaagaaagcaattagacgaaattactaattgggttaaa
agacctcagataggagcaaaagggcttgtttatgtaaaatgcaatgccgatggaagctac
aaatcatcagttgataaattctttaatcaggatgatttaaaagcttgggctgaggtttca
ggtgcagaagctaacgatttgcttttagtactttctggtgatttaaagaaaaccagaaaa
gcactgggcgaattgagactagagatgggttcaagacttggtttgagagataagaatgta
tttaaaccattgtgggttgtgaactttccattgttggagtgggacgaagagtctgaaaga
ttccatgcaatgcaccatccatttacctcgccaattccggaagaccttaaaaaattggaa
acagagccaggagaagtaagagcgaatgcttatgacatggttatcaatggtgttgaaatc
ggaggtggttctattagaattcataacagagatgtacagtctcgtatgtttgatgcatta
ggtttcactaaagaagaagctcaagcacagtttggattcttactagaagcttttgaatac
ggtgctccgccacatggtggtattgcatttggtttcgaccgtttatgttctttattcggt
ggttcagattcaatcagagactttatcgcattcccgaaaaatacttcaggaagagatgtt
atgattgattctccttcgccagcatctttagaacaacttaaagagttaggtataaaattg
ttcgaagagaaataa
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