Chondrinema litorale: OQ292_11680
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Entry
OQ292_11680 CDS
T09098
Name
(GenBank) ABC transporter permease
KO
K02004
putative ABC transport system permease protein
Organism
clit
Chondrinema litorale
Brite
KEGG Orthology (KO) [BR:
clit00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clit02000
]
OQ292_11680
Transporters [BR:
clit02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Putative ABC transporter
OQ292_11680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MacB_PCD
FtsX
Motif
Other DBs
NCBI-ProteinID:
UZR92521
LinkDB
All DBs
Position
complement(2820259..2822646)
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AA seq
795 aa
AA seq
DB search
MLKNYFQMAVRSTVKSGMTSLINLIGLAIGIACSLLIFIYVNHEVSYDQFHSKADRIFRV
LSIDEALGVSNSMVGITIPGVGAVMKDQLPEVENTVRMQQVGQALLTYEENSFYTEHTLR
AEASFFEIFDYELKEGDRNNVLRAPYKVVITEEMAQKTFGREVDPIGKSITLNNEQEYEI
TGILKDQDKPSHLRFDLIYSMYPAQSDSGLVQYLNSFNNISMTTYALLKDPAMEASVEEK
IEPILRENEVPNIWKVTLQPLSETHLNSSNVIFDNINQNKGDSSYVYSLSAIAVFVLLIA
AFNFMNLATARSTKRAREVSMRKVMGAGKTHLVIQHLGESVLMSFSALVLALIMVSITGS
IVQLPIAVEPVIYLFQNPVSLTAILGGTLLLGILAGIYPALILSSFEPVKVLKGNFSSSG
KGILLRRVLVILQFAVSIAMISGTAIVYRQLDYIKNKNLGFNKEQIVTIGLNNQQMRESA
EQLKNEFLQLPGVSYAATVSSLPGQGFGRTGLRPEGVGQEEDPWIVSIMTFDENFIDMIG
MEIAQGRNFSPDYGTEEDEAIIINEALAREFNWEKPVGKKLFFGEDERTVVGVVKDFHFA
SMRHKIEPIVMIYQPGANGSIALKIKPENMKETILQIGDSWEKVNAGMPFEYTFFDEEFG
QLFQSEESFSKLIVNFTWLAIFVACLGLFGLASFIAEQKTKEIGIRKVLGSSVSKIVALL
SKEFALLVLIANFIAWPIAWYAMDTWLQDFEYRTDISFITFFLAGFASLAIALLSVSYHS
IRAAIANPIKSLRDD
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgttaaagaactacttccagatggctgttagaagcactgtaaaaagtggtatgacctca
ctcataaacctaattggtcttgccattggcattgcttgcagcttgcttattttcatctat
gtaaatcatgaggtttcttatgatcaattccattcaaaagctgatcggatttttagagta
ctttctattgatgaggcacttggagtaagcaacagcatggttggtattaccatacccggt
gtaggtgctgtaatgaaagatcaactaccagaggtagaaaatacggtgagaatgcaacaa
gtcggacaagcattactcacttatgaagaaaatagtttttacaccgaacatacacttaga
gccgaagcatcttttttcgaaatttttgattacgaattaaaagaaggtgatagaaataat
gttttgagagccccatataaagtggtaataacagaagagatggctcaaaaaacatttggt
cgagaggttgatccaattggcaaaagtattactttaaataacgaacaagagtatgagatt
actggaattttaaaagatcaagataaaccatctcacctcaggtttgatctaatttattca
atgtatccagctcagtctgattcaggcttggttcaatatttaaactctttcaataacatt
agcatgacaacctatgccttattgaaagacccagcaatggaagccagtgtagaggaaaaa
atagaaccgattcttagagaaaacgaagtacctaacatctggaaagttactttacaacca
ctttctgaaacacacttaaattcatcaaatgtaattttcgataacatcaatcaaaacaaa
ggggattctagttatgtgtattcgctttctgccattgctgtttttgttttgttaatcgca
gccttcaattttatgaacttagcaacggctcgatctaccaaacgagcacgggaagtaagc
atgagaaaagtaatgggagctggtaaaactcatttggtaatacagcatttgggcgagtcg
gttttaatgtcgtttagtgctttggtattagccttaattatggtatcaattactggctca
atagttcaattacccattgcagtagaacctgtaatttaccttttccaaaatccagtttcg
ttgacggcaatcttaggaggaaccttattacttggaatattagcaggaatttatccagca
ttaattctatcatcatttgaacctgtaaaagttttaaaaggcaatttttcgagcagtgga
aaaggaattttgctaagaagagtattggtaattttgcagtttgcagtttctattgccatg
atttctggaacagcaatcgtttaccgccaactcgattacatcaaaaataaaaacctcggc
tttaataaagagcagattgttaccattggtttgaataaccagcaaatgcgtgaaagtgcc
gaacaattgaaaaatgaatttctacaattgccaggagtgtcttacgcagctacagtttct
tctttacccggacaaggttttggcagaacaggtttaaggcctgaaggtgtcggacaagaa
gaagacccttggatagtgagcatcatgactttcgatgaaaattttattgatatgatagga
atggaaatcgctcaaggaagaaacttttcaccagattatggaacagaagaagatgaagca
atcatcatcaatgaagctttagcaagagaattcaactgggaaaaacctgtgggtaaaaag
ctattctttggcgaggatgaaagaactgtggttggcgtggttaaggactttcactttgct
tcgatgcgccataaaattgagccaattgtaatgatttaccaacccggagctaatggcagt
attgctttaaaaataaaacctgaaaacatgaaagaaaccattttgcaaattggtgactca
tgggaaaaagtaaatgcaggtatgccatttgaatacacattctttgatgaagagtttggc
caactttttcaaagtgaagagtctttctctaaactgattgtcaattttacttggttagcc
atttttgttgcttgtctgggtttattcggcttagcctcatttattgctgagcaaaaaacc
aaagaaattggcataagaaaagtacttggctcatctgtaagtaaaatagtagccttgctt
tctaaagaattcgctttattggtgctcatcgccaactttatagcttggccaattgcttgg
tatgcaatggacacttggctgcaagacttcgagtacagaactgatattagttttatcaca
ttctttttggcaggctttgcttctttagcaattgcgcttttatctgtaagttatcattct
ataagagcggctattgctaatccaataaaaagcttgagagatgattaa
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