Chondrinema litorale: OQ292_11870
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Entry
OQ292_11870 CDS
T09098
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
clit
Chondrinema litorale
Pathway
clit00260
Glycine, serine and threonine metabolism
clit00460
Cyanoamino acid metabolism
clit00630
Glyoxylate and dicarboxylate metabolism
clit00670
One carbon pool by folate
clit00680
Methane metabolism
clit01100
Metabolic pathways
clit01110
Biosynthesis of secondary metabolites
clit01120
Microbial metabolism in diverse environments
clit01200
Carbon metabolism
clit01230
Biosynthesis of amino acids
clit01240
Biosynthesis of cofactors
clit04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
clit00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
OQ292_11870
09102 Energy metabolism
00680 Methane metabolism
OQ292_11870
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
OQ292_11870
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
OQ292_11870
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
OQ292_11870
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
OQ292_11870
Enzymes [BR:
clit01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
OQ292_11870
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Motif
Pfam:
SHMT
Beta_elim_lyase
Aminotran_1_2
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
UZR92558
LinkDB
All DBs
Position
complement(2862476..2863783)
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AA seq
435 aa
AA seq
DB search
MKRDQQVFDIIQKEYNRQKSGIELIASENFVSPQVMEAMGSVMTNKYAEGLPGKRYYGGC
EVVDQTEQLAIDRLKELFGAAWANVQPHSGAQANAAVMLAVLQPGDKILGFDLSHGGHLT
HGSPVNFSGKLYEPLFYGVEKETGVIDWDKVVAQARKEKPKLIICGASAYSRDWNYEALR
KVADEIGALLLADISHPAGLIAKGLLNDPLKYCHIVTTTTHKTLRGPRGGVIMLGEDFEN
PFGIKTPKGNLRMMSSLLDSGVFPGTQGGPLEHVIAAKAVAFSEALSDEYATYVKQVKLN
ADAMANAFLAKGYDLISGGTDNHLMLIDLRSKGLTGKIAENTLIKADITINKNMVPFDDK
SPFVTSGMRVGTAAITTRGFKEQDMQKIVDLIDQVLSNHENESKINESKKSINEWMIQYP
LFNGYEKESATIVAS
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgaagagagatcagcaagtttttgacattattcaaaaagaatataacaggcaaaagtct
ggcattgaattaattgcctcagaaaactttgtgtcaccacaagtaatggaggcaatggga
agtgtaatgaccaacaagtacgctgaaggtttaccaggaaagcgctattatggaggttgt
gaagtagttgatcagacagagcaactggcaattgatcgcttaaaagaattatttggtgca
gcttgggcaaacgtacagcctcactcaggtgcacaagcgaatgcagcagttatgcttgca
gttttgcaacctggcgataaaattttaggtttcgacctatctcacggcggacacttaacg
cacggatcacctgtaaacttttcaggtaaattatatgagccacttttttacggagtagaa
aaagaaactggtgtaattgattgggataaagttgtagcccaagcgagaaaagaaaaacca
aagttgattatttgtggtgcttcagcttattcaagagattggaactacgaagccctaaga
aaggttgctgatgaaataggagcattattacttgcagatatttctcaccctgctggctta
attgccaaaggtttgttaaatgacccgcttaaatattgccacattgtaaccacaaccaca
cataaaactttaagaggaccaagaggtggtgtaattatgctaggagaagattttgaaaat
ccattcggcataaaaactccaaaaggtaatcttagaatgatgtcttcattacttgattca
ggtgtgttcccaggtactcagggtggaccacttgagcatgttattgcagctaaagcagta
gcatttagtgaagcactttcagacgagtatgctacttatgtaaagcaagtaaaattaaat
gcagatgctatggcaaatgcatttttagcaaaaggttacgatcttatctctggcggtact
gataatcacctaatgctgatcgaccttcgctcaaagggcttaactggtaaaatcgctgaa
aacacattaattaaggcagatattaccataaataaaaacatggttccttttgatgataag
tctccgtttgtaacttcaggcatgagagtgggaactgctgcaataactactcgtggcttt
aaagagcaggatatgcaaaaaattgttgacctgatcgatcaagtattgagtaaccacgaa
aacgaaagtaaaataaacgaaagtaaaaaatctataaatgaatggatgattcagtatcca
ctatttaacggatacgaaaaagaatctgcaactattgtagcgtcttaa
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