Chondrinema litorale: OQ292_12215
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Entry
OQ292_12215 CDS
T09098
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
clit
Chondrinema litorale
Pathway
clit00521
Streptomycin biosynthesis
clit00523
Polyketide sugar unit biosynthesis
clit00541
Biosynthesis of various nucleotide sugars
clit01100
Metabolic pathways
clit01110
Biosynthesis of secondary metabolites
clit01250
Biosynthesis of nucleotide sugars
Module
clit_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
clit00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
OQ292_12215 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
OQ292_12215 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
OQ292_12215 (rfbC)
Enzymes [BR:
clit01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
OQ292_12215 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
JmjC_2
ARD
Motif
Other DBs
NCBI-ProteinID:
UZR92621
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Position
complement(2954052..2954588)
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AA seq
178 aa
AA seq
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MEKIETPIPGCFELKPRIFQDDRGKLIKTYHEDTYKDLGLSTSFTEEYYSGSKKGVLRGL
HFQTPPNEHIKCVTCISGEIFDVVVDLRKDSPTYKQHFTIELDSEKGNMLYIPAGMAHGF
YVMSDYAIFLNRTTVVFKPESDTGIKWDSCGIEWPDMSPILSDKDIALPTLDEYESPF
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaattgaaacaccaattccaggatgttttgagctgaaaccaagaatatttcag
gacgacagaggaaaacttattaaaacctaccacgaagacacttataaagacttaggactt
tctacctcatttacagaagaatattattctggctctaaaaaaggagttttaagaggatta
cattttcaaaccccgcctaacgagcacattaaatgtgtaacctgtatttcaggtgaaatt
ttcgatgttgtagttgatctaagaaaagactctcctacttacaagcaacatttcacaatt
gaattagacagcgaaaaaggaaatatgctatatattcctgctggcatggctcatggcttt
tacgtaatgagtgactacgctattttcttaaatagaaccacagttgtatttaaacccgag
agtgatactggtattaagtgggactcttgtggtattgaatggccagatatgtctcctatc
ctttcagataaagatattgctttacctactcttgatgagtacgaaagcccattctaa
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