Chondrinema litorale: OQ292_13225
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Entry
OQ292_13225 CDS
T09098
Symbol
nusA
Name
(GenBank) transcription termination factor NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
clit
Chondrinema litorale
Brite
KEGG Orthology (KO) [BR:
clit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clit03021
]
OQ292_13225 (nusA)
03009 Ribosome biogenesis [BR:
clit03009
]
OQ292_13225 (nusA)
Transcription machinery [BR:
clit03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
OQ292_13225 (nusA)
Ribosome biogenesis [BR:
clit03009
]
Prokaryotic type
rRNA transcription factors
OQ292_13225 (nusA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
KH_NusA_C
KH_2
KH_1
DUF7256
Motif
Other DBs
NCBI-ProteinID:
UZR92816
LinkDB
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Position
3213227..3214480
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AA seq
417 aa
AA seq
DB search
MDSSVLINTFADFAKLKNIDRPTMIRILEDVFRTMVRKKFNTDQNFDVIINVDKGDLEIW
RYREIVEDDAEVEDENLTIRLSEAKKIEEDFEVGEEVAEEVKIIDFGRRLVQTARQTLIQ
KVKDLEKDILFQKYKDLVGDMITCEVYQTLSREIILIDNERQELSLPKNEQIFKDRFRKG
DTVRAIIHRVEMVNNNPKIILSRTSPEFLERLFENEVPEVYDGLITIKKVVREPGERAKV
AVESYDDRIDPVGACVGMKGSRIHSIVRELQNENIDVINYTDNVELYIARALSPAKINSI
KIDESKKRASVFLNRDQVSLAIGKGGQNIKLASRLVGLEIDVFRELGEFEDDDEDVELSE
FTDVIDEWMIDELKRIGLDTAKSVLAVSPQDLFRRTELEEESIDWIREVLKKEFEQE
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggatagttcggttttaattaacacatttgcggattttgctaagttaaagaatatagat
cgtcctacgatgatccgtattctggaagatgtgttccgtaccatggttaggaaaaaattt
aacactgaccagaattttgatgttattattaacgtagataaaggtgaccttgaaatctgg
cgctatcgtgagatagttgaagatgatgctgaggtggaagacgaaaacctaaccattaga
ctttctgaagcaaagaaaatcgaagaggactttgaagtaggtgaagaagttgccgaagaa
gtaaaaattatagatttcggtagaaggttggttcaaactgcgagacaaacactaattcaa
aaagttaaggatctggaaaaagatatcctttttcagaaatacaaagatttagttggtgat
atgattacctgtgaggtatatcaaacactaagcagagaaattattctgattgataacgaa
cgtcaggaattatctcttcctaaaaacgaacaaatctttaaagacagattccgcaaaggg
gatacagtaagagccattatccatagggtagaaatggttaacaacaacccgaaaattata
ctttcaagaacttcacctgaatttttagaaagactttttgaaaacgaggtgccagaagtt
tacgatggtttaattaccattaaaaaagttgtaagagagccaggagagagagcaaaagta
gctgtagaatcttatgacgacagaattgatccagttggtgcttgtgtgggtatgaagggt
tctagaattcacagcattgtgcgtgaacttcaaaacgaaaatatcgacgtaattaactat
acagacaatgtagagctttacattgcaagagctttaagtccggctaaaatcaatagcatt
aaaatagatgaaagcaagaaaagagcttcagtatttttaaacagagatcaagtatctttg
gctattggtaaaggtggtcaaaatattaaactggctagtaggttagttggtttagaaatc
gatgtatttagagagcttggtgagtttgaagatgatgatgaagatgtggaacttagcgag
tttactgatgttatcgatgaatggatgatcgatgaattaaaaagaattggtttagataca
gcgaaaagtgttttagctgtgagccctcaggatttatttagaagaactgagttggaagag
gaatcaattgattggatcagagaggttctaaaaaaagaatttgaacaggaatga
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