Chondrinema litorale: OQ292_14265
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Entry
OQ292_14265 CDS
T09098
Name
(GenBank) efflux RND transporter permease subunit
KO
K07787
copper/silver efflux system protein
Organism
clit
Chondrinema litorale
Pathway
clit02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
clit00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
OQ292_14265
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clit02000
]
OQ292_14265
Transporters [BR:
clit02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
OQ292_14265
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ACR_tran
COE1_DBD
Motif
Other DBs
NCBI-ProteinID:
UZR93022
LinkDB
All DBs
Position
complement(3462971..3466843)
Genome browser
AA seq
1290 aa
AA seq
DB search
MINKIIRFFLENRLVTVLLTLLFIGWGWMHAPFNSSNETLSWFPKEPVAVDAIPDIGENQ
QIVFTRWAGRSPKDIEDQITYPLTSVLLGIPGVKSIRSSSLFGFSSIYLIFEEDIEFYWS
RSRILEKLNSLPSGTLPENVQPALGPDATALGQIFWYTLEGRDSTGATTGGWDLQELRTI
QEFQVKYALNAAEGVSEVASIGGYLKEYQVDLMPDAMQARQVTLPDVIKAVKASNLDVGA
STLEINRAEYFVRGLGYIKSLEDLEETVVKLKGNSPVRLKDIAHISFGPAERRGILDKSG
AEVVGGVVISRYGANPMQVIEGVKEKIAEVAPGLPQKTLEDGTVSQLHIVPYYDRSELIQ
ETLGTLEEALSLEVLITIIVVVMMVLNLRVSILISGLLPLAVLMVFICMYYAGVDANIVS
LSGIAIAIGTLVDVGIILTENLLKHLENWKSSGKSNSLLEVVYEASAEVSSAIITAVATT
IISFIPVFTLQASEGKLFTPLAFTKTFALLAAVFITLIILPTFAYFLFSSNQSVKKAQQR
KLMPYVLVFAGFVILILHFTSQVALWLSLILLALGAKALAEKYLSTRFNQYSKKRVDSIL
IVLAVAWLLAKSWMPLGVNISGFPGENMSNYLFTILVIALLLGSFSLFRYFYPRLLSWAL
ANKKSFIFIPGFLVLLGAMIWLGFDSIFSGIANVSKKAGWNLRTTSFYSSLNHTFPGVGA
EFMPALDEGAFLLMPTSMPHAGIAENKAVLQMLDMAVTAIPEVKSVVGKAGRVNSALDPA
PMSMYENVIQYKSEYLTDGDGRRIRYKTDDEGNFIIKNEDGTTSSIDKNKALYTDVNQLI
PDENGQYFRQWRSHIQSPDDIWQEIVKATSIPGVTSAPKLQPIETRLVMLQTGMRAPMGI
KIKGPDLNTIEAFGLELEKLLKEVPSVKAQAVFAERIVGKPYLEIDIDRNNAARYGLSIQ
AIQQIIETAIGGIPQTSTVEGRERYAIRVRYARELRNTPDALEQIFIPLPNGQNIPLSEV
ATFHYAQGPQMIKSEDTFLTGYVLFDKNTGYSEVEVVEAARDYLQQNIDNGNLDVPNGVS
YRFSGSYENQLRASKRLSIVIPLCLLIILLILYFQFRSLITSIMVFTGIAVAFSGAFLLI
WLYGTDWFLNFDLFGINLREMFQVKTINLSVAVWVGFIALFGIATDDGVLIATYLQQSFQ
KVKPENKEEVRKAVLDGALKRVRPALMTSATTLLALLPVITSTGRGSDIMIPMAIPSFGG
MLVALITLFVVPVLYAWRAEYQLKKGGINV
NT seq
3873 nt
NT seq
+upstream
nt +downstream
nt
atgattaacaaaattatcaggttttttctcgaaaaccgcttagttaccgtgctgcttacc
ttgctttttattggctggggatggatgcacgcaccatttaactcatcaaacgaaacgctc
agctggtttcccaaagaaccggtggcagtagatgccataccagacattggagaaaaccaa
caaatagtatttacccgctgggcagggagatcgcctaaagacattgaagatcagataacc
taccctttaacatcagttttattgggtattcccggtgtaaaaagcattagaagctcatcg
cttttcggcttttctagcatctatctgatttttgaagaagacatagaattttattggagc
agaagtcgaattttagaaaagctcaattcgcttccttcaggtactttgcccgaaaatgtg
cagccggctttagggccagatgctacagctttaggacaaatattttggtatacactcgaa
ggcagagacagcacaggagctaccactggtggctgggatttgcaagaactcagaactata
caagagtttcaggttaaatatgcattaaacgccgcagaaggagtttctgaagtggcatct
attggcggctacttaaaagagtatcaggtagatttaatgcctgatgccatgcaggcaaga
caagttactttgcctgatgtgattaaagctgtaaaagccagcaatcttgatgtaggtgcc
agtacgctagaaattaaccgtgccgaatactttgtaagaggcttgggctacataaaatcg
ctggaagatttagaagaaactgtggtgaagttgaaaggcaatagtcctgtaagactcaaa
gacattgcccatatcagttttggtccggcagaacgcagaggcattctagataagtctgga
gccgaagttgttggcggtgtggtaatctcacgctacggcgcaaacccgatgcaagtgatt
gaaggagttaaagaaaagattgctgaagttgcccccggacttccacaaaaaacattggaa
gatggtaccgtctcacaattacacattgtgccatattacgatagaagtgagctaattcag
gaaactctgggcactttagaagaagctcttagcctcgaagtactcattactattattgtt
gtggtaatgatggtactgaacctcagggtttccatattaatctctggtttattgccactg
gctgtgttaatggtatttatctgtatgtattatgcaggagtagatgccaacattgtttcg
ctttcgggaattgctattgccattggcaccttggtagatgtgggaatcatcctaactgaa
aacctactcaaacaccttgaaaactggaaaagcagtggcaaatcaaacagtttattagaa
gtagtttatgaagccagtgcagaagtatcgagtgcaattattaccgctgtagcaacaaca
attatcagttttattcctgtatttacgttgcaggcatcagaaggcaaactgtttacgcca
cttgcgtttactaagacttttgccctattggcagcagtttttatcaccttgattatactg
ccaacatttgcttatttcttattcagcagtaaccaatctgtaaaaaaagctcagcaaaga
aaattaatgccttatgtattagtatttgctggattcgtaatcctgattctacatttcact
tctcaggttgcactgtggttaagtttgattcttcttgctttgggagcaaaagcactggca
gaaaaatacctttcaacaagattcaatcaatattctaaaaagcgagttgatagtatctta
attgtactagcagttgcttggctactagctaaaagctggatgccattgggtgtaaatatt
tcaggatttccgggtgaaaacatgagcaattacctctttacaattttggtgattgcgcta
ttacttggctcattttctttgttcaggtatttttatccaagactactttcctgggcttta
gcaaataaaaaatcattcatttttattcccggatttttagtgcttttaggtgctatgatc
tggctcggcttcgatagtatttttagtggaatcgccaatgtgtctaaaaaagcaggatgg
aacttgagaactacttcattctattcgagcttaaatcacacatttccgggtgtgggtgca
gaatttatgcctgcactagatgaaggtgcttttctattgatgccgacttctatgccgcat
gctggcattgcagaaaacaaagctgtactacaaatgctagatatggcagtaactgcaatt
ccagaagttaaatcggtagtaggtaaagcaggtagagttaattcagctttagaccctgct
cctatgtctatgtacgagaatgtaattcaatacaaaagcgaatacctcactgatggagat
ggcagaagaatcagatacaaaacggatgatgaaggtaatttcattattaaaaatgaagat
ggtactaccagtagtattgataaaaacaaagctttatacacagatgtaaatcaactcatt
cctgatgaaaatgggcagtatttcaggcaatggagatcacacattcaatcaccagacgat
atatggcaagaaattgtgaaagccaccagtattcccggagttacctctgcacctaaattg
cagcctatcgaaactcgattggttatgctgcaaacaggtatgcgcgcacctatgggaatt
aagattaaaggacctgatttaaatacgattgaagcttttggtttagaactggaaaagtta
ctcaaagaagtgccttcggtaaaagcacaagctgtttttgccgaaagaattgttggcaaa
ccgtatttagaaatcgatatagacagaaacaatgctgctcgctatggcttaagcattcaa
gcaattcaacaaatcattgaaacggccattggtggcattccgcaaacttctactgtagaa
ggtagagagcgctatgcaattagagtacgctatgcgagagagttaagaaatacgccagat
gctttggaacaaatatttattccattaccaaatggacaaaacattccattatcagaagtg
gcaaccttccattatgcacaagggccacagatgattaaaagtgaagacactttcctcact
ggctatgttttattcgacaaaaatacgggttattctgaggtagaggtagttgaagctgca
cgcgattatttacagcaaaacatagataatggaaacttagatgtaccgaacggtgtgagt
tatcgcttctctggaagttacgagaatcagttgagagcatctaaaagactctcaattgtg
attcctctgtgtttgctcattattttgttgattctctatttccaattccgctcgctcatt
acttcaatcatggtgtttacaggtattgcagtcgcattctcaggagcatttctattaatc
tggctatatggcaccgactggttcttaaacttcgatctctttggaatcaatctcagagaa
atgtttcaggtaaaaaccattaacctgagtgtagctgtttgggttggttttatcgccttg
tttggcatcgctactgacgatggagttttaattgcgacttatttgcaacaatcatttcaa
aaggtaaaacctgaaaataaagaagaagtgagaaaagccgtgttagatggcgcacttaaa
agagtgagacctgcattaatgacctcagccactaccctattggcattacttccagtaatt
acctcaactggtagaggttcggatattatgattccaatggctatcccttcttttggtgga
atgttggtcgctttaatcaccttgtttgttgtaccggttttatatgcttggagagcagaa
tatcaattaaaaaaaggaggtatcaatgtttaa
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integrated database retrieval system
