Chondrinema litorale: OQ292_14410
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Entry
OQ292_14410 CDS
T09098
Symbol
dnaB
Name
(GenBank) replicative DNA helicase
KO
K02314
replicative DNA helicase [EC:
5.6.2.3
]
Organism
clit
Chondrinema litorale
Pathway
clit03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
clit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OQ292_14410 (dnaB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
clit03032
]
OQ292_14410 (dnaB)
Enzymes [BR:
clit01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
OQ292_14410 (dnaB)
DNA replication proteins [BR:
clit03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
OQ292_14410 (dnaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DnaB_C
DnaB
AAA_25
ATPase
AAA
divDNAB
AAA_24
TniB
AAA_22
NACHT
AAA_16
cobW
Motif
Other DBs
NCBI-ProteinID:
UZR93051
LinkDB
All DBs
Position
complement(3501258..3502814)
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AA seq
518 aa
AA seq
DB search
MNEDKMNINRRTSRYNATKPNVSDSTPLGKKRPYDIELEQAVLGALMLEKDALNDVIEIL
KPESFDLEAHQRIYKAILALFAKSEPIDLLTVTAQLRSSGELDIAKGAIYITQLTQRVNS
AANIEYHARLLLQYSIKRELINISNQIQRDSYEETSDVFELLDKMEQALFEVSEMNIRKN
FSGMSSIMSDAIAELESMRDQVDGLTGVPSGFSSLDRITSGWQKSDLIILAGRPGMGKTA
FVLSSLRNAAVDFGKPSAIFSLEMSSVQLVKRLISAEAELDSSKLKTGKLSEHEWKKLVD
KTAKLSEAPIFIDDTPALSILELRAKCRRLKAQHDIQMVIIDYLQLMAGESGKNGNREQE
IAMISRSLKQLAKELNIPVIALSQLSRAVETRGGDKRPQLSDLRESGSIEQDADMVIFLY
RPEYYGITEDEEGVPVTGTGEVMIEKNRHGATERVRLKFIGKYTKFTDWESDDFGGNDFI
PGFGENDFMEDPGNRSSIIVGSKINNQDKGARRDDPPF
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaagataagatgaatataaatcgcagaacatcccgctataacgccactaagccg
aatgtttctgattctactccgttgggaaaaaaaagaccttacgacatagaattggagcaa
gctgtgttgggagctctgatgttggagaaggatgctttaaatgatgtaatcgaaatttta
aagccagaatcgtttgatttagaagcacatcaaagaatttataaagcaattttggcatta
tttgccaaatctgaaccgatagaccttttaactgttacagctcaacttcgttcttctggt
gagctcgacattgctaaaggtgctatctacattacccagcttacacaaagagttaactct
gccgcaaacatagaataccatgctcgtttgcttttgcagtattctattaaaagggaactg
attaatatctcaaaccaaatccaaagagactcttacgaagaaacctctgatgtttttgaa
ttgcttgataaaatggaacaggcacttttcgaagtatctgaaatgaatatcagaaaaaac
ttttctggtatgagttctattatgagcgatgccattgcagaattggaaagtatgagagat
caggtagatggattaactggtgtgccgagtgggttctcttctctagatagaattacttct
ggttggcaaaaatctgaccttatcatattagctggtagacctggtatgggtaaaacagct
tttgtactttcgagtttaagaaatgccgcagtagactttggtaagccttctgctatattt
tctttggagatgtcgtctgtacagttggtaaaaagattaatctctgccgaagcagaacta
gacagtagcaagcttaaaacaggtaaactttctgagcatgagtggaagaaactagttgat
aaaacagctaaactttctgaagctcctatttttatagatgatacacctgctctttctatc
ttggaattacgtgcaaaatgccgaaggttaaaggctcagcacgacatccaaatggtaata
attgactacttacagttaatggcaggtgaatctggcaagaatggtaaccgtgagcaggaa
atcgcgatgatctcccgatcgctaaaacagttggcaaaagaattaaacattcctgtaatt
gcactttctcagcttagccgtgctgtagaaaccagaggtggcgataagagacctcagctt
tcagatttaagggaatctggttcaatagagcaagatgcagatatggtaatcttcctttac
agacctgagtactatggtattacagaagatgaagagggagttcctgtaactggcactggt
gaagttatgattgagaaaaacagacacggtgctacagaaagagtgagattgaagtttatt
ggtaaatacaccaaatttaccgattgggaaagcgacgattttggcggaaatgattttatt
ccaggttttggagagaatgattttatggaagacccgggaaatagatcaagcattattgta
ggaagcaagatcaataatcaagataaaggagctcgaagagatgatcctcctttctaa
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