Chondrinema litorale: OQ292_14840
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Entry
OQ292_14840 CDS
T09098
Name
(GenBank) mismatch-specific DNA-glycosylase
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
clit
Chondrinema litorale
Pathway
clit03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
clit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
OQ292_14840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clit03400
]
OQ292_14840
Enzymes [BR:
clit01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
OQ292_14840
DNA repair and recombination proteins [BR:
clit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
OQ292_14840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
CsgF
Motif
Other DBs
NCBI-ProteinID:
UZR93134
LinkDB
All DBs
Position
3602340..3602840
Genome browser
AA seq
166 aa
AA seq
DB search
MLKDVLDTNLDVVFCGTAKGKASALKGFYYAGPGNKFYSILCQTGFTPHKLDPKECYEIN
KYNIGLTDLVHTEFGNDKEISNGSYEVESFIIKMEKYQPKYIAFNSKKAASFVLGYQGKT
TQIKYGLQEKNIGESKLFVLPSTSGNARRFWNENYWLELKQLIAQA
NT seq
501 nt
NT seq
+upstream
nt +downstream
nt
atgctaaaggatgttcttgatacaaatcttgatgtagttttttgtggtacagcaaaaggt
aaagcatctgctctgaaaggattctattatgctggtccaggaaataaattctatagtatt
ttatgtcaaactggttttactccgcataaactagacccaaaagaatgttatgaaattaac
aaatataatattggattaactgatttggtacacactgagtttggaaatgataaagaaatt
tcaaatggtagttatgaagtggaaagttttatcataaaaatggagaaataccaacctaaa
tatattgcatttaatagtaaaaaagcggcatcatttgtcttagggtatcaaggaaaaact
acacagataaaatatggacttcaagagaaaaatattggtgaatcaaaactttttgttctt
ccatctacttctggtaatgcaagacggttttggaatgagaactactggcttgaattgaaa
caattaattgctcaagcttaa
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