Chondrinema litorale: OQ292_15440
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Entry
OQ292_15440 CDS
T09098
Name
(GenBank) bifunctional oligoribonuclease/PAP phosphatase NrnA
KO
K06881
bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:
3.1.3.7
3.1.13.3
]
Organism
clit
Chondrinema litorale
Pathway
clit00920
Sulfur metabolism
clit01100
Metabolic pathways
clit01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
clit00001
]
09100 Metabolism
09102 Energy metabolism
00920 Sulfur metabolism
OQ292_15440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clit03400
]
OQ292_15440
Enzymes [BR:
clit01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.7 3'(2'),5'-bisphosphate nucleotidase
OQ292_15440
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.3 oligonucleotidase
OQ292_15440
DNA repair and recombination proteins [BR:
clit03400
]
Prokaryotic type
Other factors with a suspected DNA repair function
Others
OQ292_15440
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
UZR93250
LinkDB
All DBs
Position
complement(3736110..3737129)
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AA seq
339 aa
AA seq
DB search
MQHIEALKPELEKPRKIAIIPHRRPDADALGSCLALYGYLIQVEHEVKVISPDEYPDFLK
WMKGNESVLVYENGEKRKIEKFLDSADFIFCLDFSSLDRIEDLGKLVANSKAVKVLIDHH
PGKENFAAYELYDTKASATAELIYDFLNIMGATDSLTVEMAECIYAGIMTDTGSFKYSST
SSKVHRTIADLIDVGVTPEKIHRLIYDTNSENKIKMLGFVLDQRLKVLREFNTAYMYISD
DDLKRFQSKNGDTEGLVNYALSIEGIKLAALFIDRTDSVTMSFRSVGDFSVSEFASAHFN
GGGHKNASGGKMTIPLAEVVDFFESLLPFYKDQLRQPDA
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgcagcatattgaagcactcaaaccggagctggaaaaacctagaaaaattgccataata
ccgcacaggaggcctgatgccgatgcgctgggttcttgccttgccttatatggctatttg
atacaggtagagcatgaagtaaaggttatttctccagatgaataccccgattttcttaaa
tggatgaaagggaatgaaagcgttttggtttacgaaaatggagaaaaaaggaaaatagaa
aaatttctagacagtgcagattttatattctgcctcgacttttcttctctagatagaatt
gaagatttggggaaattagtagctaattctaaagctgtaaaagtactaatagatcatcat
cctggaaaagaaaattttgctgcttacgagctatacgacaccaaagcctcagctacagca
gaacttatatacgactttcttaatataatgggagcaacagattctctaacagttgagatg
gccgagtgcatctacgccggcataatgacagatactggctcctttaaatattcaagtact
tctagcaaagtgcaccgtaccattgcagaccttatagatgtaggtgtaactcctgaaaaa
atccacagattaatttacgataccaactctgagaacaaaattaaaatgctgggttttgta
ttagaccagagattaaaagtacttagagagtttaatactgcctatatgtatatatctgat
gatgacctaaagagatttcagtcgaaaaacggagatacagaaggtttagtaaactatgcc
ctatctatagaaggcataaaactagcagctctttttatagatcgtacagattctgttact
atgtctttcagatcggtaggcgatttttctgtgagcgaatttgccagtgctcattttaat
ggtggtggccacaaaaatgcttctggtggaaaaatgactattccattggcagaagtagtt
gatttcttcgaaagccttttaccattctacaaagatcaattaagacaacctgacgcctaa
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