Chondrinema litorale: OQ292_15570
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Entry
OQ292_15570 CDS
T09098
Name
(GenBank) sigma-54 dependent transcriptional regulator
Organism
clit
Chondrinema litorale
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GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
AAA_5
HTH_7
AAA
HTH_22
AAA_2
Mg_chelatase
Torsin
HTH_11
AAA_19
HTH_24
HTH_29
TrmB
HTH_IclR
HTH_23
Motif
Other DBs
NCBI-ProteinID:
UZR93275
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Position
3765601..3766971
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AA seq
456 aa
AA seq
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MGTKSSFKIFAVEDDPVFAKMLQYVLTLDPEHEVKIFGTAMDLLDNLHHKPSLVTIDYSL
PDMEGEELLKRIKYQYAEVPVIVISGQERIKTAVKLLKSGAYDYITKDEDIRERLLNSIN
NAKKNIKLANEVEILREELSVKFDFDKTIIGNSPVIKKVFRMLEKAVNTNITVSINGETG
TGKELVAKAVHFNSSRKNKPFIPVNIAAIPSTLLESELFGYEKGSFTGANSRRIGKFEEA
HKGTIFLDEIGEMDINLQAKLLRVIQERELVRIGGNEVVKLDVRIITATHRDMAEEVKKG
NFREDLYYRLLGLPISLPPLRDRQNDVLIICKFFIDQFCKDNKLDKLVLSPDAQQKILQY
SWPGNIRELKAVTELSCVMCDGEKITSEDIQFNNLNKEVDLLSQEMTLKEYTFKIVRNYL
KKYDDNVLLVADKLNVGKSTIYRYLKEMEEENFQLR
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgggtactaaaagtagtttcaaaatatttgcagtagaagacgaccctgttttcgccaaa
atgctccaatatgttttaacactggatcctgagcatgaggtgaaaatttttgggacggca
atggacttgttagataatttacatcataaaccatctctggttactattgattattcatta
ccagatatggagggtgaagaactgcttaagcgaattaagtatcaatatgcagaagtacca
gtaattgtaatttcgggtcaagaaagaattaagacagctgtaaaactacttaaatctggg
gcgtatgattacattactaaagatgaagatattagagaaagactcttaaacagtataaac
aatgccaaaaagaatattaaactggcaaatgaagtagaaatactgagagaagaactttct
gtaaagtttgattttgataaaaccattattggaaatagtcctgtaattaaaaaggttttc
agaatgcttgaaaaggcagtgaatacgaatattacagtttcaattaatggagaaacagga
acaggaaaagagttggtggcaaaggccgttcattttaattcttcaagaaaaaataaacct
tttatacctgtaaacattgcggcaatccctagtacacttttagaaagtgagttattcggt
tatgagaaaggatcttttacaggagctaatagcagaagaataggaaagttcgaagaagct
cacaaagggactatattcttggatgaaatcggtgaaatggatattaatctccaggcaaaa
ttacttcgtgtaattcaagaaagagaacttgttagaattggaggtaatgaagttgtaaag
ttagatgtacgtatcatcactgctacacacagagatatggcagaagaggttaaaaaaggc
aactttagagaagatttgtactatagattattgggtttgccaatttctcttccaccatta
agagatcgtcaaaatgatgttttaatcatttgtaagttctttatagatcagttttgtaaa
gacaataagttggataaattagttttgtcaccagatgcgcaacaaaagatactacaatat
tcatggccgggtaatattagagagctaaaggcggtaacagaactttcttgtgtaatgtgt
gatggagagaagataacaagtgaagatattcaatttaacaatctcaataaagaggtagat
ctgttgagtcaggaaatgacacttaaagaatatacttttaagatagttagaaattatttg
aaaaaatatgacgataatgttctactagtagctgataagttaaatgttggtaagtctact
atttatcgttatttaaaagagatggaagaagagaatttccaacttagataa
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