KEGG   Chondrinema litorale: OQ292_15780
Entry
OQ292_15780       CDS       T09098                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K07713  two-component system, NtrC family, response regulator HydG
Organism
clit  Chondrinema litorale
Pathway
clit02020  Two-component system
Brite
KEGG Orthology (KO) [BR:clit00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    OQ292_15780
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:clit02022]
    OQ292_15780
Two-component system [BR:clit02022]
 NtrC family
  HydH-HydG (metal tolerance)
   OQ292_15780
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 HTH_8 AAA_5 AAA_2 AAA HTH_50 AAA_22 Mg_chelatase UPF0175 PDE8A_N AAA_16 HTH_29 Torsin HTH_28 HTH_17 HTH_23
Other DBs
NCBI-ProteinID: UZR93317
LinkDB
Position
3815811..3817217
AA seq 468 aa
MPKILIVDDDPSFGLMLKKFLEKKGFEANEVLTGKSCLEKMAEESFDLALLDFRLPDMDG
LDLLKAIRQKNIQIPIILMTSYANIRTAVKAIQMGAFEYLVKPINPDETLLLIKQALNQP
KETKKSEAPETDKGSAEKSKPVSKGGIKFIEGISNESTEVIKYIDLVAPTSLSVIILGES
GTGKEYVSRMIHQKSKRADKPFIAIDCGALSEELAGSELFGHLKGSFTGAVTDKTGQFQA
ANGGTLFLDEIGNLSYEVQVKLLRAIQEGMVRKIGSNKDEAVDVRIIAATNEELSDAAKR
GDFREDLYHRLNEFKIEVSPLRKRKEDIQVFADHFLAQSNNELDKKIKGFTPEVKKYFQE
YSWPGNLREFKNIVRRAVLLSTGDYIGQESLPEEITNPIVEDSFDEGTPQSSSSVSTNNL
KEMIEKNERETIVRTLEQVKYNKSKAARILNIDRKTLYNKLKQYGIDA
NT seq 1407 nt   +upstreamnt  +downstreamnt
atgccgaagattctgatagttgatgatgatccgtcattcggattgatgttgaaaaaattt
ttggaaaaaaagggctttgaagctaacgaagttctaactggtaagagttgtttggagaaa
atggctgaagagtcatttgatttggctttgctggatttcagattgcccgatatggatgga
ctggatttactaaaagccattaggcaaaagaatatccaaattcccattattttaatgact
agctatgcgaatattcgtacagcagttaaagccatccaaatgggagcgtttgaatatctg
gtaaagccaattaatcctgacgaaactttattgttaattaaacaagcacttaaccaacca
aaagaaacaaagaagagcgaagcaccagaaactgataaaggtagtgctgagaaatctaaa
cctgtaagcaaaggtggtataaagtttatcgaaggtatctcaaatgagtctaccgaagta
attaagtatatagaccttgttgctccaacctcattatctgtaattattttgggtgaaagt
ggtaccggtaaagaatatgtttcccgtatgattcaccaaaaaagtaaaagagcagataaa
ccatttatcgcgattgattgtggtgctttatctgaagaacttgctggtagcgaattattt
ggacacttaaaaggctcttttactggtgctgtaacagataaaactggtcagtttcaggct
gcaaatggtggaacactatttcttgatgaaattgggaacttgtcttatgaagtacaggta
aaacttttacgagcgatacaagaaggtatggttcggaaaattggtagtaataaagacgaa
gctgtggatgtgagaattatcgctgcaaccaacgaagagttgtcagatgctgccaagaga
ggcgattttagagaagatttataccatcgtttaaatgaatttaaaattgaggtgtcgcct
ttaagaaagcgtaaagaagatattcaggtttttgcagatcattttcttgctcagtctaat
aatgagttagataaaaagattaaaggttttacaccagaagtaaaaaagtattttcaggag
tatagctggccgggtaatcttagagaatttaaaaacatagtaagaagagcagtgctctta
agtactggtgattatataggccaagaaagtttacctgaagaaataaccaatcctattgtt
gaagacagttttgatgaaggtacaccacaatcttctagctcagtttctaccaataatctt
aaagagatgattgagaaaaacgagcgcgaaacaattgtgagaacgctagagcaggtgaag
tataacaagtctaaagctgccagaattctaaatatcgacagaaaaacgctttacaacaaa
ttaaagcaatatggtatagatgcttaa

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