Chondrinema litorale: OQ292_16730
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Entry
OQ292_16730 CDS
T09098
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
clit
Chondrinema litorale
Pathway
clit03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
clit00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OQ292_16730 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clit03019
]
OQ292_16730 (groL)
03110 Chaperones and folding catalysts [BR:
clit03110
]
OQ292_16730 (groL)
03029 Mitochondrial biogenesis [BR:
clit03029
]
OQ292_16730 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
clit04147
]
OQ292_16730 (groL)
Enzymes [BR:
clit01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
OQ292_16730 (groL)
Messenger RNA biogenesis [BR:
clit03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
OQ292_16730 (groL)
Chaperones and folding catalysts [BR:
clit03110
]
Heat shock proteins
HSP60 / Chaperonin
OQ292_16730 (groL)
Mitochondrial biogenesis [BR:
clit03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
OQ292_16730 (groL)
Exosome [BR:
clit04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
OQ292_16730 (groL)
Exosomal proteins of other body fluids (saliva and urine)
OQ292_16730 (groL)
Exosomal proteins of breast cancer cells
OQ292_16730 (groL)
Exosomal proteins of colorectal cancer cells
OQ292_16730 (groL)
Exosomal proteins of bladder cancer cells
OQ292_16730 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
divDNAB
Motif
Other DBs
NCBI-ProteinID:
UZR93499
LinkDB
All DBs
Position
4053396..4055036
Genome browser
AA seq
546 aa
AA seq
DB search
MAKSIIFDTKARESLKKGVDTLAEAVKVTLGPKGRNVILDKKFGAPSITKDGVSVAKEIE
LKDPVENMGAQLVKEVASKTADQAGDGTTTATVLTQAIFTTGIKNVTAGANPMDLKRGID
QAVASVVAELASMSKSVDSSKEISQVATISANNNQEVGKMIAEAMDKVGKDGVITVEEAK
GTETEVKTVEGMQFDRGYLSPYFVTNTDKMEADLESPFILIYDKKISNMKELLPVLEAVA
QTGRPLVIIAEDVEGEALATLVVNKIRGALKIAAVKAPGFGDRRKAMLEDIAILTGGTVI
SEERGYKLENATLEYLGTAEKMLIDKDNTTIVNGSGSQDDIQARVAQIKQQIENTTSDYD
REKLQERLAKLSGGVAILYIGAATEVEMKEKKDLVDDALHATRAAVEEGIVAGGGIALIR
AVNSLDSLEVENEDQETGVNIVRIALESPLRTIVGNAGLEASVIVQKVKESTGNFGYNAR
TGEYEDLVQAGVIDPTKVTRLALQNAASIASLLLTTECVIADEPEENPAPMGGGHPGMGG
GMPGMM
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagtcaataatatttgatactaaggctagagaaagtcttaaaaaaggagtggat
acattagcagaagcagttaaagtaactttaggtccaaaaggaagaaatgtaatccttgac
aaaaagtttggtgctccttctattacaaaagatggtgtttctgttgcaaaagaaatcgaa
ttgaaagatccagttgagaatatgggtgctcaattggttaaagaagtagcttctaaaact
gctgaccaagctggtgacggaactacaactgcaactgttttaacgcaagcaatttttacc
actggtattaaaaacgttactgcaggtgcaaacccaatggatcttaaaagaggtattgac
caagctgttgcttcagtagttgctgaattagcaagcatgtcaaaatctgttgatagctct
aaagaaatttctcaggtagctactatttctgctaacaacaaccaagaagtaggtaagatg
attgccgaagctatggacaaagttggtaaagatggtgttatcactgttgaagaggcaaaa
ggtactgaaactgaagttaaaactgtagaaggtatgcagtttgacagaggttacctttct
ccatactttgttactaacactgacaaaatggaggctgaccttgaaagcccattcattctt
atctacgacaagaaaatttctaacatgaaggaattacttcctgtattggaagcagttgct
caaactggtagacctcttgttattatcgctgaagatgttgaaggagaagcattagctact
ctagtagtaaacaaaatcagaggtgcattaaaaattgctgctgttaaagctccaggcttt
ggtgacagaagaaaagcaatgttagaagatatcgctatcttaactggtgggactgtaatt
tctgaagaaagaggttacaaattagaaaatgctactcttgagtacttaggtactgctgag
aaaatgttaatcgacaaagacaacactactatcgtaaatggaagtggaagtcaagatgac
attcaagctcgcgttgctcaaatcaaacaacaaatcgaaaacactacttctgattacgat
cgtgagaaattgcaagaaagacttgctaaactttctggcggtgtagctatcctatacatt
ggtgctgctactgaagtagaaatgaaagaaaagaaagacttagttgatgatgctttacac
gcaactagagctgctgtagaagaaggtattgttgctggtggtggtattgctcttatccgt
gcggtaaattctttagatagcctagaggtagaaaacgaagatcaggaaactggtgtaaac
atcgttagaatcgctcttgagtctccactaagaactatcgttggtaacgctggtcttgag
gcttctgttatcgtacaaaaagtaaaagaaagcactggtaacttcggttacaatgctcgt
actggtgaatacgaagaccttgtacaagcaggtgtaattgacccaactaaagttactaga
cttgcattacaaaatgcagcttctatcgcttcattactacttactactgagtgtgtaatt
gcagacgaaccagaagaaaatccagctccaatgggtggtggacacccaggaatgggcggc
ggaatgccaggtatgatgtaa
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