Chondrinema litorale: OQ292_18010
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Entry
OQ292_18010 CDS
T09098
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
clit
Chondrinema litorale
Brite
KEGG Orthology (KO) [BR:
clit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
clit03036
]
OQ292_18010 (smc)
Chromosome and associated proteins [BR:
clit03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
OQ292_18010 (smc)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
AAA_29
Snapin_Pallidin
AAA_23
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
UZR93745
LinkDB
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Position
4356952..4360485
Genome browser
AA seq
1177 aa
AA seq
DB search
MLLQRLEIKGFKSFGEKVVLNFDIGVTGVVGPNGSGKSNVVDAIRWVLGEQSSKALRSEK
MENVIFNGTKNRKAQQMAEVGLSFKNTKNLLPTEYSEITITRRYYRSGDSEYLLNGVTCR
LKDIQSLFMDTGISSDSYAIIELKMVDEILNDQNQSRRQLFEEAAGISKFKKRKKETLKK
LADTSDDLERVEDLLHEIGKNMRSLERQAKQAERYLKLKKEYKELSIVLAKELLKDQVEK
TAIIEKEIENASDQKLSIQKQQSEGEAALEKEKLELVKKEQLLSSRQKTLNNHVNKIRQF
ESEKKIKSERLRFLTEKANSLQSQLLEELKSNERAKFSIEGLLNEKESLEKQIKEATFLL
DKSKQEFENQKGSTDKLKEQLKEISLQFKTRQNRVYQLKKDLEISQVQQSSLMQELEKEH
TESTEKSASLDEFDFKLGELTEELAEKQEQLGRAEFRQNELDTQIESAEASLQKLKEELA
KSSRELDAKQNEYNLTKSMVDNLEGYPQAIKFLKKQTNWGKNFPLLSDIIAAEEKYRVCI
ENYLEPYLNYYILDNEALALEAVNLLSDSAKGKGNFLVLDKFKSFSPSAKRQFEDAIPAI
NIVEFDDKYRELVHYMLDNVYVVTSNQESIPKDNDFTFITQNGKVIKRKYSVSGGSVGLF
EGKKLGRAKNLEKLSERIKELQSKNKNLDKIINQKIQDISYLKSESQKDKIGRLQEEISI
LKQENVSIVTKKEQFSELLLDQQNRRENIEEKLSQLRETIEQLHPELEDEEGKLSYFEEN
QDDLRATLEEENELLNQKSAAFNQNNISYHTYNNKFESIEKEISYKENAFDRGKAKIENH
QEDLKHTEQEIVQMQETSGNNEDELVGMYDEKSSIEEGVNEAEKDYYASRGEIAEYEKVI
REYQRKKEQLEGLILDLKDKINQEKMKTASVKERVSVEFEVDVDELLKPIEETEEYEGDL
DSLKEKVVNTKKKMENIGPINHMAIEAYNEIKERNDFISEQKKDLIEAIDSLNTTIAEID
KVAKENFMDAFTKVRSYFIEVFRSLFTDEDSCDLILLDESDPLNSKIEIIAQPKGKKPLT
INQLSGGEKTLTATALLFAIYLLKPAPFCIFDEVDAPLDDANIDKFNNIIKKFSENSQFI
IVTHNKRTMSTTDVIYGITMIEQGVSTVVPVDLREMS
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgttattacaacgactcgaaataaagggatttaagagctttggcgaaaaggtagtttta
aactttgatataggagtaactggtgtagttggtccaaatggaagtggtaaatctaatgtg
gttgatgctatacgctgggtattgggcgagcaaagcagcaaggctttacgttccgaaaaa
atggaaaatgtaatttttaatggtacaaaaaaccgtaaagctcaacaaatggctgaggtt
ggtttgtcttttaaaaacaccaaaaatctacttcctacagaatattctgaaattacaatt
actcgtcgatattacagaagtggagacagtgagtatttgttgaatggtgtaacctgccga
ttaaaagatattcagtcgctttttatggatactggtataagttcagatagttatgccatt
atcgagttaaaaatggttgatgagatcttaaacgatcaaaatcaatctagaaggcaatta
ttcgaagaagctgcgggaatctctaaattcaagaaaaggaaaaaagagacacttaagaaa
ttagcagatactagtgacgatttagaaagggtagaagatctattgcatgagattggtaag
aatatgcgatctctggaaaggcaagcaaaacaggcagaacgttacttaaaacttaaaaaa
gaatacaaagaactaagtattgtattagcaaaagaattgctgaaagaccaagttgagaaa
actgctataattgaaaaagaaatagaaaatgcttctgatcaaaaactttctatccagaaa
caacagtcggagggtgaagcagctttagaaaaggagaaactggaattagttaaaaaggaa
caattactttcttcaagacaaaaaacactaaataaccatgttaataaaatcaggcaattt
gagagtgaaaagaagataaagagtgaaaggcttagatttttaacagagaaggctaattca
ttacaaagtcaattattagaagagctaaagagtaatgagagagccaagtttagtatcgaa
ggtcttttaaatgaaaaagaaagtctggaaaagcagattaaagaggcaacttttttactt
gataaaagcaaacaggaatttgaaaatcaaaagggaagtactgataaattaaaagaacaa
ttaaaggaaatttcactccagtttaaaactcgacaaaacagagtatatcagctcaaaaaa
gatttagagatcagccaagtgcagcaatcttctttgatgcaggagttggaaaaagagcat
actgaatctacagagaaaagtgctagtttagatgagtttgattttaaattaggagagctg
actgaagaacttgctgaaaagcaagagcaattaggaagagcagaatttaggcaaaatgaa
ctagacactcaaatagaatctgctgaagcttctttacagaagttaaaggaagaacttgca
aaatcgagtagagaactagatgctaaacagaatgagtacaacctaaccaagtctatggtt
gataatttggaaggttatcctcaagcgatcaaattcttaaaaaagcagaccaactggggg
aaaaacttcccgcttctttcagatattattgctgcagaagaaaaatacagagtttgtatt
gagaattatttggagccttatctaaactactatattctcgataatgaagccttggctttg
gaagctgtaaatcttttaagtgattcggctaaaggaaaggggaattttctagtgctagat
aaatttaaaagcttttctccatcagctaaaagacaatttgaagatgcaataccagctata
aacattgttgagtttgacgataaatatcgtgagttggtgcattacatgttggataatgtt
tatgtagtaacttcgaatcaggagtctattccaaaagataatgatttcacctttattact
caaaatgggaaggtaattaaaaggaaatacagtgtttcgggaggttctgttggtttgttt
gaaggtaagaaacttggtagagctaaaaaccttgaaaagctttctgaaaggattaaagaa
ctacaaagcaagaataaaaatcttgataaaataatcaatcagaagattcaagatattagt
tacttaaaaagcgaatctcaaaaagacaaaataggtaggcttcaagaagaaataagcata
ttaaaacaggaaaatgtaagtattgtaacgaaaaaagaacaattttctgaattgcttctt
gatcagcaaaataggagagagaacatagaagaaaagcttagccaattgcgtgaaactatt
gagcaattacatcctgagctagaagatgaagaaggtaagttgagttactttgaggaaaat
caagacgatttaagagcaacattagaagaagaaaatgaattactcaatcagaaatctgct
gcatttaatcaaaataatatctcatatcatacttataacaacaaatttgaaagtatagag
aaagagataagctataaagaaaatgcttttgacagagggaaggcaaaaattgaaaatcat
caagaagatttaaagcatactgagcaagagattgtacagatgcaagaaaccagtggaaac
aacgaagacgaactcgttggtatgtacgatgagaaatctagtatagaagaaggagtaaat
gaagcagagaaagactattatgcatctagaggagaaattgcagaatacgaaaaagtaatt
agagagtaccaacgaaaaaaggagcagttagaaggattaattttagatttaaaggataag
attaatcaggagaaaatgaaaactgcatcggtaaaagagcgggtttctgtggagtttgaa
gttgatgtagatgaacttttaaagccaattgaagagacagaagagtatgagggtgatctt
gattcattaaaagaaaaagtagtcaatacaaaaaagaaaatggaaaatattggtccgatt
aaccatatggcaattgaggcttataatgagataaaagaaaggaatgattttatatcagag
caaaaaaaggatttgatagaggcaatcgattcattaaatacaacaattgcagagatcgat
aaagtagcaaaagaaaactttatggatgcttttactaaagtgagaagctattttattgaa
gtttttaggtctctatttacagatgaagatagctgtgatttaattcttttggatgaaagc
gatccgctaaattctaaaatagaaataattgctcagccaaaagggaagaaacctttaacc
atcaatcagttatctggtggtgaaaaaacattaacagcaacagcattactttttgcaatt
taccttctaaaaccagctccattctgtatttttgacgaggttgatgcacctttagatgat
gccaacatcgataagtttaataatattattaagaaattttcagaaaactctcagttcata
attgtaacacacaacaaacgaactatgtctactacagatgtaatttatggaattacaatg
attgagcagggagtatctacagttgttcctgtagatttaagagaaatgagctaa
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