Chondrinema litorale: OQ292_18500
Help
Entry
OQ292_18500 CDS
T09098
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
clit
Chondrinema litorale
Brite
KEGG Orthology (KO) [BR:
clit00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
clit01002
]
OQ292_18500
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
clit01011
]
OQ292_18500
Peptidases and inhibitors [BR:
clit01002
]
Cysteine peptidases
Family C82
OQ292_18500
Peptidoglycan biosynthesis and degradation proteins [BR:
clit01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
OQ292_18500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
UZR93841
LinkDB
All DBs
Position
complement(4476513..4478216)
Genome browser
AA seq
567 aa
AA seq
DB search
MFKLNYAVKAFIILFTFSINLINQVQAQDDEISFEIKRLVESLVEKNSLDIEGVTIYSKT
VLPIYYQNRNYKHGWTNNSSTEESLKSIGRAGEEGLSPEDYHYDLLLNLRKELTETRNPA
ASSVAHFDLLLTDAVLLYSRHLLNGKVNPVKIESTWNIQRKVFSGDSLAVLEDGIANNKI
PYLLESIKPDHPLYKGLKKHLAHYRLLAKKGGWQKIDAGPTLKPGMEDARILQVRKRLAL
EGFLPDMGIKIPYTNFFVNDSIIGEEPENEKIYDRELATAIARFQLAYSLEVDSAIGQMT
LDALNVPIEERIDQIRVNLERARWVLGTLGDDYVLVNIAGFELFLIRNGKEIWKTNVVVG
KKYSQTPVFKDRIQFIVFNPTWTVPPGIMSSETLPRMKKDGNYLSSHDLEMVDNKGNALS
QSILTESQYTLRTFPYQVRQRPGDNNALGRVKFMFPNKYSIYLHDTPSKSYFSKTSRAYS
HGCVRVENPLKLAEVILNDPVNYSAEKIQKIIKTNQTTTVNLKNKLDVLLLYWTAEIHPS
GKLYFKEDVYNRDKKVLTELDEKRPRI
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaactaaattatgctgtaaaagcattcatcattctttttactttttccatcaat
ttaatcaaccaagtacaagctcaagatgacgaaatatcatttgagataaaaagattagtt
gaaagtcttgttgaaaaaaacagtcttgatattgaaggagtaaccatctattctaaaact
gttttaccgatttactatcaaaacagaaattacaaacatggctggacaaacaacagctcc
accgaagaatccctaaaatcaattggcagagctggtgaagaaggactctctcccgaagac
taccattacgatttactactgaatttaagaaaagaacttactgaaacccgcaatccagca
gcctcaagtgtagctcattttgatttgctgctcaccgatgctgttttattatactcaaga
catttactaaatggcaaagtaaatccggtaaagattgaatctacatggaatatacagcgc
aaagtttttagtggtgattcgctagcagtcttagaagatggcattgccaacaataaaatt
ccttatttactagaaagcataaaaccagatcatccactttacaaaggattaaaaaaacac
ttagcacactacagattgttggctaaaaaaggaggatggcaaaaaatagatgcaggccct
actttaaaacctggcatggaagacgctcgaattttacaggttagaaaaaggctagcatta
gaaggttttttgcctgatatgggtattaaaatcccttacactaatttctttgtaaacgat
tcgattattggcgaagaacccgaaaacgaaaaaatatacgatagagaattagccacagcc
attgccagatttcagttggcttacagcctagaagtagacagcgctatcgggcaaatgact
ttggatgcgctcaatgttcccattgaagaacgtatagatcagattcgtgtaaatttagaa
agagccagatgggtattaggaactttgggcgatgattatgttttggtaaacattgccggt
ttcgaattatttctgattagaaatggcaaagaaatctggaaaaccaatgttgtagttggt
aaaaaatacagccaaactccagtgtttaaagacagaatccagtttattgtttttaaccca
acttggacagttccacccggaattatgagttcagaaacattaccaagaatgaaaaaggat
ggcaactacctaagtagccacgatttagaaatggtagacaacaaaggcaatgcactttct
caaagtatattaaccgaatctcagtatactttaagaactttcccctaccaggtaagacaa
agacctggagataataatgcgcttggcagagttaaatttatgttcccaaataaatactct
atctacttacacgacacaccaagcaaaagttatttttccaaaacttcgagagcttatagc
catggttgtgtgagagtagaaaaccctttaaaattagcagaagttatattgaatgatccg
gtaaactacagcgctgaaaaaattcagaagattataaaaacaaaccaaaccaccactgta
aatcttaaaaacaagctagatgtattattgctttactggacagccgagatacatccgagt
ggtaaattatactttaaagaagatgtatataatcgcgataaaaaggttttaacagagctt
gatgaaaaacgacctcgcatttaa
DBGET
integrated database retrieval system
